RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 BLOC1S4Q9NUP1 217 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 ZDHHC7Q9NXF8 308 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 LIMD1Q9UGP4 676 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 GDAQ9Y2T3 454 aa10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 MORC2Q9Y6X9 1032 aaPredicted RBP10.67□□□□□ -0.7
TMEM39A-210ENST00000490099 MTCL1Q9Y4B5 1905 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 DENND4AQ7Z401 1863 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 ADAM12O43184 909 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 TBC1D4O60343 1298 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 N4BP1O75113 896 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 RFPL2O75678 378 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 ZMYND10O75800 440 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 ADRB2P07550 413 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 POU2F2P09086 479 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 LIG1P18858 919 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 LONP1P36776 959 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 SOX4Q06945 474 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 MCL1Q07820 350 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 RAB33AQ14088 237 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 ZBTB6Q15916 424 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 SLC10A6Q3KNW5 377 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 PDXDC1Q6P996 788 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 ELMSAN1Q6PJG2 1045 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 PRSS55Q6UWB4 352 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 MPZL3Q6UWV2 235 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 RTL10Q7L3V2 364 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 PALB2Q86YC2 1186 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 TDRD5Q8NAT2 981 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 ZBTB45Q96K62 511 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 CCDC94Q9BW85 323 aaPredicted RBP10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 CNTN3Q9P232 1028 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 EPS15L1Q9UBC2 864 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 ODF2LQ9ULJ1 636 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 BACE2Q9Y5Z0 518 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 TRIP11Q15643 1979 aa10.66□□□□□ -0.7
TMEM39A-210ENST00000490099 FAM189A1O60320 539 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 B3GAT3O94766 335 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 PIGRP01833 764 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 SPATA31D3P0C874 917 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 RPL17P18621 184 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 PDCP20941 246 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 SP100P23497 879 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 HOXA9P31269 272 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 RPL9P32969 192 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 UBA7P41226 1012 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 CLCNKBP51801 687 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 SMTNP53814 917 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 NCKAP1LP55160 1127 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 MTMR3Q13615 1198 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 MRPL58Q14197 206 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 SF3A1Q15459 793 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 ZNF568Q3ZCX4 644 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 SPATA31D4Q6ZUB0 917 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 CCDC149Q6ZUS6 474 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 C3orf58Q8NDZ4 430 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 ACSF2Q96CM8 615 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 SNX27Q96L92 541 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 ACAP3Q96P50 834 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 FIZ1Q96SL8 496 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 PLIN2Q99541 437 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 HAPLN2Q9GZV7 340 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 PLEKHA5Q9HAU0 1116 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 TSHZ2Q9NRE2 1034 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 TOPORSQ9NS56 1045 aaPredicted RBP10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 SLC38A7Q9NVC3 462 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 IGSF9Q9P2J2 1179 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 LARSQ9P2J5 1176 aaKnown RBP10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 MTRRQ9UBK8 725 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 FBXW11Q9UKB1 542 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 PLXNA3P51805 1871 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 DOCK8Q8NF50 2099 aa10.65□□□□□ -0.7
TMEM39A-210ENST00000490099 C2orf16Q68DN1 1984 aa10.65□□□□□ -0.71
TMEM39A-210ENST00000490099 VWA8A3KMH1 1905 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 NPHP3-ACAD11A0A0J9YXS1 232 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 TTC26A0AVF1 554 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 H0YCG3 227 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 ASGR2P07307 311 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 HNRNPA1P09651 372 aaKnown RBP eCLIP10.64□□□□□ -0.713e-6■■■■□ 19.4
TMEM39A-210ENST00000490099 SYT1P21579 422 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 AVPR2P30518 371 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 DDIT3P35638 169 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 RESTQ13127 1097 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 PSMD5Q16401 504 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 UVSSAQ2YD98 709 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 GLRA4Q5JXX5 417 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 SLC8B1Q6J4K2 584 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 RSPO2Q6UXX9 243 aaPredicted RBP10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 HAUS6Q7Z4H7 955 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 HASPINQ8TF76 798 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 SMG7Q92540 1137 aaKnown RBP10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 RAD54LQ92698 747 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 NXPE3Q969Y0 559 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 PRRX2Q99811 253 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 REEP2Q9BRK0 252 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 SMOC2Q9H3U7 446 aa10.64□□□□□ -0.71
TMEM39A-210ENST00000490099 ST6GALNAC4Q9H4F1 302 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms