RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ARL6IP4Q66PJ3 421 aaKnown RBP21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 CWF19L1Q69YN2 538 aaKnown RBP21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 ASTLQ6HA08 431 aaPredicted RBP21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 SLC44A3Q8N4M1 653 aa21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 SPIRE2Q8WWL2 714 aa21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 STAMQ92783 540 aa21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 TBC1D32Q96NH3 1257 aa21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 MTRRQ9UBK8 725 aa21.29■■□□□ 1
TNFRSF1B-202ENST00000489921 ZFHX2Q9C0A1 2572 aaPredicted RBP21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 NPHP3-ACAD11A0A0J9YXS1 232 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 I3L4J1 428 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 GALR2O43603 387 aaPredicted RBP21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 MCF2P10911 925 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 LAMP2P13473 410 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 PLS3P13797 630 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 KCNE1P15382 129 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 TKTP29401 623 aaKnown RBP21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 BRCC3P46736 316 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 RAB33AQ14088 237 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 MPZL3Q6UWV2 235 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 KCTD17Q8N5Z5 321 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 SNX27Q96L92 541 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 UROC1Q96N76 676 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 CCDC94Q9BW85 323 aaPredicted RBP21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 HAPLN2Q9GZV7 340 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 PIDD1Q9HB75 910 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 FAM86C1Q9NVL1 165 aa21.28■■□□□ 1
TNFRSF1B-202ENST00000489921 ANHXE9PGG2 379 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 H3BQV1 296 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 PI15O43692 258 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 PLA2G4BP0C869 781 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 MAPTP10636 758 aaKnown RBP21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 OR1D2P34982 312 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 CLCN5P51795 746 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 NTHL1P78549 312 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 PDXDC1Q6P996 788 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 APBB1IPQ7Z5R6 666 aaPredicted RBP21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 GRASPQ7Z6J2 395 aaPredicted RBP21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 DDX27Q96GQ7 796 aaKnown RBP21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 TOPORSQ9NS56 1045 aaPredicted RBP21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 CNTN3Q9P232 1028 aa21.27■■□□□ 1
TNFRSF1B-202ENST00000489921 H0Y858 1186 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 C8AP07357 584 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 HNRNPA1P09651 372 aaKnown RBP eCLIP21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 HOXA9P31269 272 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 MCM2P49736 904 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 YARSP54577 528 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 GRIN1Q05586 938 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SLC10A6Q3KNW5 377 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 C18orf25Q96B23 403 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ACAP3Q96P50 834 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SMC3Q9UQE7 1217 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 BACE2Q9Y5Z0 518 aa21.26■□□□□ 0.99
TNFRSF1B-202ENST00000489921 KRBA1A5PL33 1030 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 TBC1D4O60343 1298 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 TOM1L1O75674 476 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 CACNB1Q02641 598 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 HTR4Q13639 388 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SEZ6Q53EL9 994 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 AXDND1Q5T1B0 1012 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 LARP1BQ659C4 914 aaKnown RBP21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 GET4Q7L5D6 327 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 TMEM130Q8N3G9 435 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ST13P5Q8NFI4 369 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 KCNN1Q92952 543 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 TCHPQ9BT92 498 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 KCND2Q9NZV8 630 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 CDY1Q9Y6F8 540 aa21.25■□□□□ 0.99
TNFRSF1B-202ENST00000489921 MYH15Q9Y2K3 1946 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 PODXLO00592 558 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 CCL16O15467 120 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 FSHRP23945 695 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 NCKAP1LP55160 1127 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 UVSSAQ2YD98 709 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 PPM1LQ5SGD2 360 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SIX5Q8N196 739 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SLC7A14Q8TBB6 771 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 NXPE3Q969Y0 559 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 RPP25Q9BUL9 199 aaKnown RBP21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 BLOC1S4Q9NUP1 217 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SLC38A7Q9NVC3 462 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 WNT16Q9UBV4 365 aa21.24■□□□□ 0.99
TNFRSF1B-202ENST00000489921 TRAPPC3O43617 180 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 CFHP08603 1231 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 POU2F2P09086 479 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 HARSP12081 509 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 AOC1P19801 751 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 MCL1Q07820 350 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 CUL4AQ13619 759 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 MRPL58Q14197 206 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 LIN9Q5TKA1 542 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 SLC8B1Q6J4K2 584 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ZPBP2Q6X784 338 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ANKS3Q6ZW76 656 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 FLCNQ8NFG4 579 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 ITFG1Q8TB96 612 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 AK8Q96MA6 479 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 MFSD1Q9H3U5 465 aa21.23■□□□□ 0.99
TNFRSF1B-202ENST00000489921 HCFC1R1Q9NWW0 138 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms