RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 PDCD11Q14690 1871 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 NPHP3-ACAD11A0A0J9YXS1 232 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 HIDE1A8MVS5 230 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 EIF5BO60841 1220 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 OFD1O75665 1012 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 FGF18O76093 207 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 DDHD2O94830 711 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 ZSCAN20P17040 1043 aaPredicted RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 ARF4P18085 180 aaPredicted RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 IGFBP6P24592 240 aaPredicted RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 CCT6AP40227 531 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 DNM2P50570 870 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 GNL2Q13823 731 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 TEAD4Q15561 434 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 SPOUT1Q5T280 376 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 EEF1DP3Q658K8 133 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 LRRC69Q6ZNQ3 347 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 USP49Q70CQ1 688 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 CHSY3Q70JA7 882 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 DAW1Q8N136 415 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 IGSF22Q8N9C0 903 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 TPCN2Q8NHX9 752 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 ATXN2LQ8WWM7 1075 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 SAMD11Q96NU1 681 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 C11orf84Q9BUA3 381 aaPredicted RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 POLR3CQ9BUI4 534 aaPredicted RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 RUSC1Q9BVN2 902 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 APOL6Q9BWW8 343 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 GBP3Q9H0R5 595 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 NSUN3Q9H649 340 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 ELAC1Q9H777 363 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 NRDE2Q9H7Z3 1164 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 TUFT1Q9NNX1 390 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 FAM105AQ9NUU6 356 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 DDX19AQ9NUU7 478 aaKnown RBP9.03□□□□□ -0.96
HUWE1-213ENST00000489876 TBC1D13Q9NVG8 400 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 CLDND1Q9NY35 253 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 LMCD1Q9NZU5 365 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 SMC3Q9UQE7 1217 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 PCDHB2Q9Y5E7 798 aa9.03□□□□□ -0.96
HUWE1-213ENST00000489876 MUC3AQ02505 3323 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 CITO14578 2027 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 TCHHQ07283 1943 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 INO80B-WBP1J3KQ70 363 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 FSCN2O14926 492 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 ADAM23O75077 832 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 RB1P06400 928 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 LIG1P18858 919 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 RPA1P27694 616 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 ADH6P28332 368 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 NOS2P35228 1153 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 NRIP1P48552 1158 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 SLC11A1P49279 550 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 ATP2C1P98194 919 aaPredicted RBP9.02□□□□□ -0.97
HUWE1-213ENST00000489876 RAD51AP2Q09MP3 1159 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 MAPK7Q13164 816 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 COL19A1Q14993 1142 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 ZRSR1Q15695 479 aaKnown RBP9.02□□□□□ -0.97
HUWE1-213ENST00000489876 SAMD5Q5TGI4 173 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 PLPP4Q5VZY2 271 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 LARP1BQ659C4 914 aaKnown RBP9.02□□□□□ -0.97
HUWE1-213ENST00000489876 KCNT2Q6UVM3 1135 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 OTUD6AQ7L8S5 288 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 SRGAP1Q7Z6B7 1085 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 SNX29Q8TEQ0 813 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 P2RX5Q93086 422 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 UHRF1Q96T88 793 aaPredicted RBP9.02□□□□□ -0.97
HUWE1-213ENST00000489876 APOL5Q9BWW9 433 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 INO80BQ9C086 356 aaPredicted RBP9.02□□□□□ -0.97
HUWE1-213ENST00000489876 BHMT2Q9H2M3 363 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 NXF3Q9H4D5 531 aaKnown RBP9.02□□□□□ -0.97
HUWE1-213ENST00000489876 KLK14Q9P0G3 267 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 CLEC1BQ9P126 229 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 LRWD1Q9UFC0 647 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 RAPGEFL1Q9UHV5 662 aa9.02□□□□□ -0.97
HUWE1-213ENST00000489876 DBR1Q9UK59 544 aaKnown RBP9.02□□□□□ -0.97
HUWE1-213ENST00000489876 BARX2Q9UMQ3 279 aaPredicted RBP9.02□□□□□ -0.97
HUWE1-213ENST00000489876 VPS37CA5D8V6 355 aaPredicted RBP9.01□□□□□ -0.97
HUWE1-213ENST00000489876 VWA3AA6NCI4 1184 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 LRRIQ4A6NIV6 560 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 SFI1A8K8P3 1242 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 DKC1O60832 514 aaKnown RBP eCLIP9.01□□□□□ -0.97
HUWE1-213ENST00000489876 NPTXRO95502 500 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 POMCP01189 267 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 CYP11B2P19099 503 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 SFPQP23246 707 aaKnown RBP eCLIP9.01□□□□□ -0.97
HUWE1-213ENST00000489876 AKAP5P24588 427 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 TRAPPC10P48553 1259 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 BCAR1P56945 870 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 RESTQ13127 1097 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 ADAM15Q13444 863 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 PTPROQ16827 1216 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 SPECC1Q5M775 1068 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 ZNF468Q5VIY5 522 aaPredicted RBP9.01□□□□□ -0.97
HUWE1-213ENST00000489876 TAS1R1Q7RTX1 841 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 MRPL10Q7Z7H8 261 aaKnown RBP9.01□□□□□ -0.97
HUWE1-213ENST00000489876 THNSL1Q8IYQ7 743 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 SLC39A11Q8N1S5 342 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 NEK9Q8TD19 979 aa9.01□□□□□ -0.97
HUWE1-213ENST00000489876 FOXD4L4Q8WXT5 416 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms