RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 BRDTQ58F21 947 aaPredicted RBP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SH3D19Q5HYK7 790 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SLC39A4Q6P5W5 647 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ABHD15Q6UXT9 468 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 NOP9Q86U38 636 aaKnown RBP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 RETREG3Q86VR2 466 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 PALB2Q86YC2 1186 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CCDC60Q8IWA6 550 aaPredicted RBP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CD302Q8IX05 232 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 FBXL13Q8NEE6 735 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ZSWIM2Q8NEG5 633 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 DNERQ8NFT8 737 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 TRPM4Q8TD43 1214 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 EPS8L1Q8TE68 723 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 LRRC45Q96CN5 670 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 RNPC3Q96LT9 517 aaKnown RBP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 KREMEN1Q96MU8 473 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ZIM3Q96PE6 472 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 RPS6KC1Q96S38 1066 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 HINFPQ9BQA5 517 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 AP1M1Q9BXS5 423 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 RAB17Q9H0T7 212 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 XPNPEP1Q9NQW7 623 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 PDLIM7Q9NR12 457 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 CYP26B1Q9NR63 512 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 FAM114A2Q9NRY5 505 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 C1orf112Q9NSG2 853 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 TAS2R14Q9NYV8 317 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ARHGAP28Q9P2N2 729 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 FBXO40Q9UH90 709 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 OTOFQ9HC10 1997 aa10.28□□□□□ -0.76
RAB3GAP1-205ENST00000489858 ZNF233A6NK53 670 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 TMEM110-MUSTN1A8MSY1 372 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 CYP26A1O43174 497 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 SART1O43290 800 aaKnown RBP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 EXTL3O43909 919 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 SGPL1O95470 568 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 FGGP02679 453 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 FTLP02792 175 aaPredicted RBP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 CHRNB2P17787 502 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 RFC5P40937 340 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 GUCY2FP51841 1108 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 PTENP60484 403 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 INSM1Q01101 510 aaPredicted RBP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 GCNT1Q02742 428 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 STRN3Q13033 797 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 PRPF4BQ13523 1007 aaKnown RBP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 MTMR3Q13615 1198 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 SEL1L2Q5TEA6 688 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 LRIG3Q6UXM1 1119 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 TRMT1LQ7Z2T5 733 aaKnown RBP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 HELQQ8TDG4 1101 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 RIN2Q8WYP3 895 aaPredicted RBP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 SEMA4DQ92854 862 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 KCNN1Q92952 543 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 KAT5Q92993 513 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ZBTB9Q96C00 473 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ZNF653Q96CK0 615 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 TRIM11Q96F44 468 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ZSWIM1Q9BR11 485 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 DDX47Q9H0S4 455 aaKnown RBP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ZNF302Q9NR11 478 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 TOPORSQ9NS56 1045 aaPredicted RBP10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 RAB20Q9NX57 234 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 GPRC5DQ9NZD1 345 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 UVRAGQ9P2Y5 699 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 RASAL2Q9UJF2 1139 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 GTF3C4Q9UKN8 822 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 COG5Q9UP83 839 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 AFG3L2Q9Y4W6 797 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ADGRA3Q8IWK6 1321 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 PTPRFP10586 1907 aa10.27□□□□□ -0.77
RAB3GAP1-205ENST00000489858 GOLGA6L10A6NI86 522 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 A6NNZ2 444 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 SHOX2O60902 331 aaPredicted RBP10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 PIGRP01833 764 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 CYP1A2P05177 515 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 FAM153BP0C7A2 387 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ITGA4P13612 1032 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 KRT5P13647 590 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 NAMPTP43490 491 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 HNRNPH2P55795 449 aaKnown RBP10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 SOX10P56693 466 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 FMO1Q01740 532 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 DHX34Q14147 1143 aaKnown RBP10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 PSMD6Q15008 389 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 TUBB8Q3ZCM7 444 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 FAM153CQ494X1 144 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 FAM160B1Q5W0V3 765 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ZNF677Q86XU0 584 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 CCDC125Q86Z20 511 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 GPC2Q8N158 579 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ANKRD35Q8N283 1001 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 C1orf131Q8NDD1 294 aaKnown RBP10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 DEPTORQ8TB45 409 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 ZNF564Q8TBZ8 553 aaPredicted RBP10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 TAS1R2Q8TE23 839 aa10.26□□□□□ -0.77
RAB3GAP1-205ENST00000489858 DHX38Q92620 1227 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms