RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 SERPINC1P01008 464 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 TNNC2P02585 160 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 AFPP02771 609 aaKnown RBP15.03■□□□□ -0
C9orf3-221ENST00000489562 THP07101 528 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 TMEM191BP0C7N4 346 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 ATP1A3P13637 1013 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 IBSPP21815 317 aaPredicted RBP15.03■□□□□ -0
C9orf3-221ENST00000489562 CETN1Q12798 172 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 GRIK3Q13003 919 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 DUOXA2Q1HG44 320 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 FILIP1LQ4L180 1135 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 NOMO2Q5JPE7 1267 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 CLLU1OSQ5K130 101 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 JADE1Q6IE81 842 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 PLEKHO2Q8TD55 490 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 ANKRD36BP1Q96IX9 119 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 INTS13Q9NVM9 706 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 SLC4A7Q9Y6M7 1214 aa15.03■□□□□ -0
C9orf3-221ENST00000489562 GOLGA6L3A6NEY3 463 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 PTGESO14684 152 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 PMM2O15305 246 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 P4HA2O15460 535 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 DGKIO75912 1065 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 TPM3P06753 285 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 NFICP08651 508 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 TRIM49P0CI25 452 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 TRIM49CP0CI26 452 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 CYP3A5P20815 502 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 COPB1P53618 953 aaKnown RBP15.02■□□□□ -0
C9orf3-221ENST00000489562 WNT7BP56706 349 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 DLG4P78352 724 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 DEFB103AP81534 67 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 TFAMQ00059 246 aaKnown RBP15.02■□□□□ -0
C9orf3-221ENST00000489562 KCNH2Q12809 1159 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 ZBTB6Q15916 424 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 VWA3BQ502W6 1294 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 RASIP1Q5U651 963 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 KRT39Q6A163 491 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 EFCAB13Q8IY85 973 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 GSTCDQ8NEC7 633 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 BEST2Q8NFU1 509 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 HELQQ8TDG4 1101 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 ZFP42Q96MM3 310 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 PPP1R10Q96QC0 940 aaKnown RBP15.02■□□□□ -0
C9orf3-221ENST00000489562 GDF15Q99988 308 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 NDST4Q9H3R1 872 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 TMEM8AQ9HCN3 771 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 RNF19AQ9NV58 838 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 TAB2Q9NYJ8 693 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 INPP5FQ9Y2H2 1132 aa15.02■□□□□ -0
C9orf3-221ENST00000489562 COL4A6Q14031 1691 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 GTPBP10A4D1E9 387 aaKnown RBP15.01□□□□□ -0.01
C9orf3-221ENST00000489562 CARNS1A5YM72 827 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 LGALS16A8MUM7 142 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 H0YGN5 161 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 RBAK-RBAKDNI3L0D1 243 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 TULP1O00294 542 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-221ENST00000489562 CBFA2T2O43439 604 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 UPP2O95045 317 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 FGFR1P11362 822 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 FMO5P49326 533 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 MXI1P50539 228 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 SCNN1GP51170 649 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 FANCCQ00597 558 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 MLLT1Q03111 559 aaPredicted RBP15.01□□□□□ -0.01
C9orf3-221ENST00000489562 ZACNQ401N2 412 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 MIIPQ5JXC2 388 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 C1orf220Q5T0J3 134 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 FKBP15Q5T1M5 1219 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 SARM1Q6SZW1 724 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 APTXQ7Z2E3 356 aaKnown RBP15.01□□□□□ -0.01
C9orf3-221ENST00000489562 LRRC43Q8N309 656 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 ZMAT2Q96NC0 199 aaKnown RBP15.01□□□□□ -0.01
C9orf3-221ENST00000489562 CASD1Q96PB1 797 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 UBE2OQ9C0C9 1292 aaKnown RBP15.01□□□□□ -0.01
C9orf3-221ENST00000489562 ITGA11Q9UKX5 1188 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 GBF1Q92538 1859 aa15.01□□□□□ -0.01
C9orf3-221ENST00000489562 SCN1AP35498 2009 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 PTPRJQ12913 1337 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 A0A1B0GTH6 734 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 FSD2A1L4K1 749 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 PES1O00541 588 aaKnown RBP15□□□□□ -0.01
C9orf3-221ENST00000489562 GJB5O95377 273 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 GCLMP48507 274 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 UBASH3AP57075 661 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 MYL7Q01449 175 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 RNASELQ05823 741 aaKnown RBP15□□□□□ -0.01
C9orf3-221ENST00000489562 PPP3CAQ08209 521 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 TUSC3Q13454 348 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 BIRC3Q13489 604 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 GLRA4Q5JXX5 417 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 C15orf39Q6ZRI6 1047 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 SV2AQ7L0J3 742 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 CMTR2Q8IYT2 770 aaKnown RBP15□□□□□ -0.01
C9orf3-221ENST00000489562 OR5B17Q8NGF7 314 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 RNPC3Q96LT9 517 aaKnown RBP15□□□□□ -0.01
C9orf3-221ENST00000489562 UROC1Q96N76 676 aa15□□□□□ -0.01
C9orf3-221ENST00000489562 FAM193BQ96PV7 902 aaPredicted RBP15□□□□□ -0.01
C9orf3-221ENST00000489562 POP1Q99575 1024 aaKnown RBP15□□□□□ -0.01
C9orf3-221ENST00000489562 MTMR12Q9C0I1 747 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms