RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 CYP3A7P24462 503 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 NLRP11P59045 1033 aaKnown RBP9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 PRKCEQ02156 737 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 KRT17Q04695 432 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 ACAD11Q709F0 780 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 RTN4RL1Q86UN2 441 aaPredicted RBP9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 GJD3Q8N144 294 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 ZBTB10Q96DT7 871 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 FAM20AQ96MK3 541 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 UIMC1Q96RL1 719 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 OSMRQ99650 979 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 PLAGL2Q9UPG8 496 aa9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 MRPL42Q9Y6G3 142 aaKnown RBP9.9□□□□□ -0.82
TNRC6B-208ENST00000489500 GRM6O15303 877 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 EOMESO95936 686 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 PDGFAP04085 211 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 SFPQP23246 707 aaKnown RBP eCLIP9.89□□□□□ -0.833e-6■■□□□ 14.4
TNRC6B-208ENST00000489500 MPSTP25325 297 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 PPM1AP35813 382 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 NDUFV1P49821 464 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 PSMC5P62195 406 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 LETM2Q2VYF4 491 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 TMEM31Q5JXX7 168 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 XKR5Q6UX68 686 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 OTUD6AQ7L8S5 288 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 NEK8Q86SG6 692 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 FAM178BQ8IXR5 827 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 SLFN12Q8IYM2 578 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 THNSL1Q8IYQ7 743 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 NEK9Q8TD19 979 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 POF1BQ8WVV4 589 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 KLHDC7BQ96G42 594 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 NECAB3Q96P71 396 aaPredicted RBP9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 ADAM19Q9H013 955 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 UNC45AQ9H3U1 944 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 ALG13Q9NP73 1137 aaKnown RBP9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 CHST12Q9NRB3 414 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 TTC28Q96AY4 2481 aa9.89□□□□□ -0.83
TNRC6B-208ENST00000489500 MYO7AQ13402 2215 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 CHD9Q3L8U1 2897 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 PLXNA4Q9HCM2 1894 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 C9IYK1 514 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 H3BQ06 376 aaPredicted RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 TBX3O15119 743 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 CCNT1O60563 726 aaKnown RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 ADAM11O75078 769 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 GPR32O75388 356 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 PSMD10O75832 226 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 QARSP47897 775 aaKnown RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 CLCN3P51790 818 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 NCBP1Q09161 790 aaKnown RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 MTMR3Q13615 1198 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 INF2Q27J81 1249 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 C8orf34Q49A92 452 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 MTERF2Q49AM1 385 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 PPP4R3AQ6IN85 833 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 ZNF410Q86VK4 478 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 FAM228AQ86W67 206 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 LRRC43Q8N309 656 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 KLHL23Q8NBE8 558 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 LINC01599Q8WXQ3 324 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 FOXD4L4Q8WXT5 416 aaPredicted RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 LENG9Q96B70 501 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 CCDC43Q96MW1 224 aaKnown RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 PPP1R16BQ96T49 567 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 CDCA3Q99618 268 aaPredicted RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 MRPL9Q9BYD2 267 aaKnown RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 TMEM117Q9H0C3 514 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 TMX1Q9H3N1 280 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 RC3H2Q9HBD1 1191 aaKnown RBP9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 TLR9Q9NR96 1032 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 CD207Q9UJ71 328 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 ATG2AQ2TAZ0 1938 aa9.88□□□□□ -0.83
TNRC6B-208ENST00000489500 TRANK1O15050 2925 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 ASAP2O43150 1006 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 GAS2O43903 313 aaKnown RBP9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 PFKFB2O60825 505 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 TDP2O95551 362 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 ITGB1P05556 798 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 CENPBP07199 599 aaPredicted RBP9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 P4HBP07237 508 aaKnown RBP9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 DARSP14868 501 aaKnown RBP9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 CES1P23141 567 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 KRT2P35908 639 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 EIF1AXP47813 144 aaKnown RBP9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 GPC3P51654 580 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 POLGP54098 1239 aaPredicted RBP9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 FAM189BP81408 668 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 SCRN1Q12765 414 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 SAFBQ15424 915 aaKnown RBP eCLIP9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 ARMC10Q8N2F6 343 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 LRRC71Q8N4P6 559 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 EFHBQ8N7U6 833 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 RNF169Q8NCN4 708 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 SPPL3Q8TCT6 385 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 UBASH3BQ8TF42 649 aa9.87□□□□□ -0.83
TNRC6B-208ENST00000489500 TCP11Q8WWU5 503 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms