RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 SLX1AQ9BQ83 275 aa9.48□□□□□ -0.89
CSMD2-209ENST00000489419 HINFPQ9BQA5 517 aa9.48□□□□□ -0.89
CSMD2-209ENST00000489419 AP1M1Q9BXS5 423 aa9.48□□□□□ -0.89
CSMD2-209ENST00000489419 RAB17Q9H0T7 212 aa9.48□□□□□ -0.89
CSMD2-209ENST00000489419 C1orf112Q9NSG2 853 aa9.48□□□□□ -0.89
CSMD2-209ENST00000489419 BTBD7Q9P203 1132 aa9.48□□□□□ -0.89
CSMD2-209ENST00000489419 AGO2Q9UKV8 859 aaKnown RBP9.48□□□□□ -0.89
CSMD2-209ENST00000489419 A0A0G2JMZ2 1700 aa9.48□□□□□ -0.89
CSMD2-209ENST00000489419 WDR90Q96KV7 1748 aa9.48□□□□□ -0.89
CSMD2-209ENST00000489419 FARP2O94887 1054 aaPredicted RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 C4BPAP04003 597 aaKnown RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 MYBL1P10243 752 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 DLATP10515 647 aaKnown RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 GLRA2P23416 452 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 MAGEA9P43362 315 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 EFNA5P52803 228 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 ERVK-9P63128 1117 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 DHX34Q14147 1143 aaKnown RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 SPDYCQ5MJ68 293 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 TREML2Q5T2D2 321 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 EMC10Q5UCC4 262 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 LEKR1Q6ZMV7 388 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 SEPT14Q6ZU15 432 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 ERO1BQ86YB8 467 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 SULF1Q8IWU6 871 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 NLGN2Q8NFZ4 835 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 RUNDC3BQ96NL0 473 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 ARPC5LQ9BPX5 153 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 ZSWIM1Q9BR11 485 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 UTP11Q9Y3A2 253 aaKnown RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 TELO2Q9Y4R8 837 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 PCDHB2Q9Y5E7 798 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 PCDHGA4Q9Y5G9 962 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 MYH9P35579 1960 aaKnown RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 LCTP09848 1927 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 A0A0B4J269 797 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 SOWAHBA6NEL2 793 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 GRIN3BO60391 1043 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 MAFO75444 373 aaPredicted RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 IVLP07476 585 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 MMEP08473 750 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 FAM153BP0C7A2 387 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 UBA1P22314 1058 aaKnown RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 CTNNA2P26232 953 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 GBP1P32455 592 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 PEX5P50542 639 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 STAT5BP51692 787 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 SP4Q02446 784 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 GRM1Q13255 1194 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 MTMR3Q13615 1198 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 CLEC16AQ2KHT3 1053 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 FAM153CQ494X1 144 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 DCAF12L1Q5VU92 463 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 METTL7BQ6UX53 244 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 ZPBP2Q6X784 338 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 CD101Q93033 1021 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 DDX47Q9H0S4 455 aaKnown RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 AVENQ9NQS1 362 aaPredicted RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 FAM153AQ9UHL3 310 aa9.47□□□□□ -0.89
CSMD2-209ENST00000489419 RRP15Q9Y3B9 282 aaKnown RBP9.47□□□□□ -0.89
CSMD2-209ENST00000489419 ESYT3A0FGR9 886 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 ZSCAN5CA6NGD5 496 aaPredicted RBP9.46□□□□□ -0.89
CSMD2-209ENST00000489419 DCAF8L1A6NGE4 600 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 ADCY3O60266 1144 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 ITGA4P13612 1032 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 IER5Q5VY09 327 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 TRIM72Q6ZMU5 477 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 ZNF564Q8TBZ8 553 aaPredicted RBP9.46□□□□□ -0.89
CSMD2-209ENST00000489419 ASAP3Q8TDY4 903 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 TMEM143Q96AN5 459 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 THOC1Q96FV9 657 aaKnown RBP9.46□□□□□ -0.89
CSMD2-209ENST00000489419 ZIM3Q96PE6 472 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 PCYT2Q99447 389 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 PLVAPQ9BX97 442 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 TOPORSQ9NS56 1045 aaPredicted RBP9.46□□□□□ -0.89
CSMD2-209ENST00000489419 CWC15Q9P013 229 aaKnown RBP9.46□□□□□ -0.89
CSMD2-209ENST00000489419 CNTN6Q9UQ52 1028 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 TRPC6Q9Y210 931 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 PCDHA3Q9Y5H8 950 aa9.46□□□□□ -0.89
CSMD2-209ENST00000489419 LRRIQ4A6NIV6 560 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 SHOX2O60902 331 aaPredicted RBP9.46□□□□□ -0.9
CSMD2-209ENST00000489419 HLA-DRAP01903 254 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 TNNI1P19237 187 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 COMTP21964 271 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 TBXAS1P24557 533 aaPredicted RBP9.46□□□□□ -0.9
CSMD2-209ENST00000489419 ECHS1P30084 290 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 CHRNA3P32297 505 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 FOXD4Q12950 439 aaPredicted RBP9.46□□□□□ -0.9
CSMD2-209ENST00000489419 HLTFQ14527 1009 aaKnown RBP eCLIP9.46□□□□□ -0.9
CSMD2-209ENST00000489419 CRELD2Q6UXH1 353 aaPredicted RBP9.46□□□□□ -0.9
CSMD2-209ENST00000489419 MMS22LQ6ZRQ5 1243 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 ANKRD13AQ8IZ07 590 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 TCP11Q8WWU5 503 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 RIN2Q8WYP3 895 aaPredicted RBP9.46□□□□□ -0.9
CSMD2-209ENST00000489419 ALG3Q92685 438 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 VCPIP1Q96JH7 1222 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 CGRRF1Q99675 332 aa9.46□□□□□ -0.9
CSMD2-209ENST00000489419 JPH2Q9BR39 696 aaPredicted RBP9.46□□□□□ -0.9
CSMD2-209ENST00000489419 NUP85Q9BW27 656 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms