RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TRPV1Q8NER1 839 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 LMO3Q8TAP4 145 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 ACTRT1Q8TDG2 376 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 RFFLQ8WZ73 363 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 TAF4BQ92750 862 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 POM121Q96HA1 1249 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 PNKPQ96T60 521 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 NIFKQ9BYG3 293 aaKnown RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 MLXIPQ9HAP2 919 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 ATP6V0A4Q9HBG4 840 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 TMEM8AQ9HCN3 771 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 KMT5AQ9NQR1 393 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 SLC5A4Q9NY91 659 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 SUCLA2Q9P2R7 463 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 HDAC6Q9UBN7 1215 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 TTC7AQ9ULT0 858 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 MAFBQ9Y5Q3 323 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-207ENST00000489357 LRRC37A2A6NM11 1700 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 PDE4DIPQ5VU43 2346 aa9.13□□□□□ -0.95
VTI1A-207ENST00000489357 SIP14410 1827 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 SYNGAP1Q96PV0 1343 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 IGKV6D-21A0A0A0MT36 114 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 ANKRD62A6NC57 917 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CCDC188H7C350 402 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 ATP9AO75110 1047 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 PALMO75781 387 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 STBD1O95210 358 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 LDHAP00338 332 aaKnown RBP9.12□□□□□ -0.95
VTI1A-207ENST00000489357 GJB1P08034 283 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 RHOXF2BP0C7M4 288 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF865P0CJ78 1059 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CYBAP13498 195 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 EN2P19622 333 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CNGA1P29973 690 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 NAMPTP43490 491 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 PLA2G4AP47712 749 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 AARSP49588 968 aaKnown RBP eCLIP9.12□□□□□ -0.95
VTI1A-207ENST00000489357 MXI1P50539 228 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 GPC3P51654 580 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 MFAP3P55082 362 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 WNT7BP56706 349 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 ACTR2P61160 394 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 VSNL1P62760 191 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 TNNC1P63316 161 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CLDN10P78369 228 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 NEDD9Q14511 834 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 SMC1AQ14683 1233 aaKnown RBP9.12□□□□□ -0.95
VTI1A-207ENST00000489357 RPS6KA1Q15418 735 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 SNRNP35Q16560 246 aaKnown RBP9.12□□□□□ -0.95
VTI1A-207ENST00000489357 UGCGQ16739 394 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CBWD6Q4V339 395 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CBWD3Q5JTY5 395 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CBWD5Q5RIA9 395 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 WDR78Q5VTH9 848 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 KRT39Q6A163 491 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 ANKRD35Q8N283 1001 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 LRRC57Q8N9N7 239 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 AFAP1L1Q8TED9 768 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CTNNBL1Q8WYA6 563 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-207ENST00000489357 FAM167AQ96KS9 214 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CEP170P1Q96L14 293 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 MFSD14AQ96MC6 490 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 NAP1L3Q99457 506 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-207ENST00000489357 RHOXF2Q9BQY4 288 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 TINF2Q9BSI4 451 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 CYP26B1Q9NR63 512 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 ARHGAP28Q9P2N2 729 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 GABBR1Q9UBS5 961 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 SALL4Q9UJQ4 1053 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 TFR2Q9UP52 801 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 STYXL1Q9Y6J8 313 aa9.12□□□□□ -0.95
VTI1A-207ENST00000489357 EMSYQ7Z589 1322 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 DENND3A2RUS2 1198 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 MIF4GDA9UHW6 222 aaKnown RBP9.11□□□□□ -0.95
VTI1A-207ENST00000489357 DDX3XO00571 662 aaKnown RBP eCLIP9.11□□□□□ -0.954e-10■□□□□ 10.6
VTI1A-207ENST00000489357 SLC16A4O15374 487 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 SRGAP2O75044 1071 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 MTA2O94776 668 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 KIF4AO95239 1232 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 CCL5P13501 91 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 CYP2C19P33261 490 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 ABL2P42684 1182 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 SLC26A2P50443 739 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 EPHB4P54760 987 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 SH3BP2P78314 561 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 PRKCEQ02156 737 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 APBA1Q02410 837 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 GCNT1Q02742 428 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 ARID5AQ03989 594 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 DMTNQ08495 405 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 CASP8Q14790 479 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 TERF2Q15554 542 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 HSP90B2PQ58FF3 399 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 FAM102BQ5T8I3 360 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 FAM160B1Q5W0V3 765 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 C11orf63Q6NUN7 778 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 C8orf74Q6P047 294 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 CCNI2Q6ZMN8 369 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-207ENST00000489357 UBE2Q1Q7Z7E8 422 aa9.11□□□□□ -0.95
VTI1A-207ENST00000489357 ZNF598Q86UK7 904 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms