RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 RNF4P78317 190 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 SETQ01105 290 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 TLE2Q04725 743 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 FPGSQ05932 587 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 SSRP1Q08945 709 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 MTMR1Q13613 665 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 TOB2Q14106 344 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 LY6KQ17RY6 165 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 HABP4Q5JVS0 413 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 CELF3Q5SZQ8 465 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 GALNT17Q6IS24 598 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 FBXL19Q6PCT2 694 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 USP17L6PQ6QN14 398 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 METTL7BQ6UX53 244 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 SESTD1Q86VW0 696 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 FAM126BQ8IXS8 530 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 TDHQ8IZJ6 230 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 REXO1Q8N1G1 1221 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 TMEM199Q8N511 208 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 SLC43A3Q8NBI5 491 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 WASF1Q92558 559 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 TNPO1Q92973 898 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 IL17RAQ96F46 866 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 SPATA33Q96N06 139 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 GDF15Q99988 308 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 SENP7Q9BQF6 1050 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 UPF3BQ9BZI7 483 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 ZMYND12Q9H0C1 365 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 ALDH8A1Q9H2A2 487 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 SLKQ9H2G2 1235 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 MTIF3Q9H2K0 278 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 GOLGA2P5Q9HBQ8 144 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 METTL5Q9NRN9 209 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 DDX41Q9UJV9 622 aaKnown RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 ZNF215Q9UL58 517 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 PCDHA6Q9UN73 950 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 POLR3KQ9Y2Y1 108 aaPredicted RBP5.81□□□□□ -1.48
SF3A3-207ENST00000488934 PCDHA8Q9Y5H6 950 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 DOCK5Q9H7D0 1870 aa5.81□□□□□ -1.48
SF3A3-207ENST00000488934 MYH9P35579 1960 aaKnown RBP5.8□□□□□ -1.48
SF3A3-207ENST00000488934 STK36Q9NRP7 1315 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 hCG_1642624A0A1W2PR95 340 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 UPK3BL1B0FP48 263 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 UPK3BL2E5RIL1 263 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 GREM1O60565 184 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 ARIH2O95376 493 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 PARNO95453 639 aaKnown RBP5.8□□□□□ -1.48
SF3A3-207ENST00000488934 F2P00734 622 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 TIMP1P01033 207 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 CD4P01730 458 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 PFKMP08237 780 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 RAC2P15153 192 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 SREBF1P36956 1147 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 ZNF165P49910 485 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 NLRP5P59047 1200 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 CCT2P78371 535 aaKnown RBP5.8□□□□□ -1.48
SF3A3-207ENST00000488934 ARHGAP1Q07960 439 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 PPIGQ13427 754 aaKnown RBP eCLIP5.8□□□□□ -1.484e-11■■□□□ 11.4
SF3A3-207ENST00000488934 FAM47CQ5HY64 1035 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 MFSD5Q6N075 450 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 PSRC1Q6PGN9 363 aaPredicted RBP5.8□□□□□ -1.48
SF3A3-207ENST00000488934 NIPA1Q7RTP0 329 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 C7orf31Q8N865 590 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 AFG1LQ8WV93 481 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 TMEM40Q8WWA1 233 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 ALPK1Q96QP1 1244 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 SDF4Q9BRK5 362 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 SLC26A6Q9BXS9 759 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 ANO3Q9BYT9 981 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 PRO3102Q9H379 93 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 HIPK3Q9H422 1215 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 PRDM7Q9NQW5 492 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 FAM53CQ9NYF3 392 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 GMIPQ9P107 970 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 TBX21Q9UL17 535 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 PCDHB14Q9Y5E9 798 aa5.8□□□□□ -1.48
SF3A3-207ENST00000488934 DDX49Q9Y6V7 483 aaKnown RBP5.8□□□□□ -1.48
SF3A3-207ENST00000488934 TRIM43BA6NCK2 446 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 B4GALT4O60513 344 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 ATE1O95260 518 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 RPLP2P05387 115 aaKnown RBP5.79□□□□□ -1.48
SF3A3-207ENST00000488934 GNAT1P11488 350 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 TPP2P29144 1249 aaPredicted RBP5.79□□□□□ -1.48
SF3A3-207ENST00000488934 RFC2P35250 354 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 GDNFP39905 211 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 SLC26A2P50443 739 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 NEK4P51957 841 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 AK2P54819 239 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 MRPS9P82933 396 aaKnown RBP5.79□□□□□ -1.48
SF3A3-207ENST00000488934 RAD51AP2Q09MP3 1159 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 STK3Q13188 491 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 BFSP2Q13515 415 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 NTRK3Q16288 839 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 KCNMB1Q16558 191 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 UBE2SQ16763 222 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 HSDL1Q3SXM5 330 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 LRIT3Q3SXY7 679 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 CEP55Q53EZ4 464 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 ZSWIM9Q86XI8 627 aa5.79□□□□□ -1.48
SF3A3-207ENST00000488934 RPUSD2Q8IZ73 545 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms