RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 MUC6Q6W4X9 2439 aa25.28■■□□□ 1.64
CUL4A-209ENST00000488558 NPHP3-ACAD11A0A0J9YXS1 232 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 RFPL2O75678 378 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 CACNB1Q02641 598 aaPredicted RBP25.27■■□□□ 1.64
CUL4A-209ENST00000488558 MCL1Q07820 350 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 RESTQ13127 1097 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 KARSQ15046 597 aaKnown RBP25.27■■□□□ 1.64
CUL4A-209ENST00000488558 PTPAQ15257 358 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 HAUS6Q7Z4H7 955 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 CEP57Q86XR8 500 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 GLYCTKQ8IVS8 523 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 FBXL6Q8N531 539 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 RASSF8Q8NHQ8 419 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 SMG7Q92540 1137 aaKnown RBP25.27■■□□□ 1.64
CUL4A-209ENST00000488558 ANKFY1Q9P2R3 1169 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 MORC2Q9Y6X9 1032 aaPredicted RBP25.27■■□□□ 1.64
CUL4A-209ENST00000488558 CLUHO75153 1309 aa25.27■■□□□ 1.64
CUL4A-209ENST00000488558 ZMYND10O75800 440 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 SPATA31D3P0C874 917 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 ABCD1P33897 745 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 SOX4Q06945 474 aaPredicted RBP25.26■■□□□ 1.63
CUL4A-209ENST00000488558 CD300LGQ6UXG3 332 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 SPATA31D4Q6ZUB0 917 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 SUGP1Q8IWZ8 645 aaKnown RBP25.26■■□□□ 1.63
CUL4A-209ENST00000488558 LARP4BQ92615 738 aaKnown RBP25.26■■□□□ 1.63
CUL4A-209ENST00000488558 ZBTB45Q96K62 511 aaPredicted RBP25.26■■□□□ 1.63
CUL4A-209ENST00000488558 ZMAT2Q96NC0 199 aaKnown RBP25.26■■□□□ 1.63
CUL4A-209ENST00000488558 PRKD2Q9BZL6 878 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 PARVGQ9HBI0 331 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 GOLGA2P5Q9HBQ8 144 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 MTRRQ9UBK8 725 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 CLIC4Q9Y696 253 aa25.26■■□□□ 1.63
CUL4A-209ENST00000488558 MYO10Q9HD67 2058 aa25.25■■□□□ 1.63
CUL4A-209ENST00000488558 K7ELQ4 463 aaPredicted RBP25.25■■□□□ 1.63
CUL4A-209ENST00000488558 CLDN3O15551 220 aa25.25■■□□□ 1.63
CUL4A-209ENST00000488558 C3orf58Q8NDZ4 430 aa25.25■■□□□ 1.63
CUL4A-209ENST00000488558 LIMD1Q9UGP4 676 aa25.25■■□□□ 1.63
CUL4A-209ENST00000488558 FBXO2Q9UK22 296 aaPredicted RBP25.25■■□□□ 1.63
CUL4A-209ENST00000488558 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.25■■□□□ 1.63
CUL4A-209ENST00000488558 MEFVO15553 781 aaPredicted RBP25.24■■□□□ 1.63
CUL4A-209ENST00000488558 FAM13AO94988 1023 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 PIGRP01833 764 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 ASGR2P07307 311 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 HNRNPA1P09651 372 aaKnown RBP eCLIP25.24■■□□□ 1.63
CUL4A-209ENST00000488558 HARSP12081 509 aaKnown RBP25.24■■□□□ 1.63
CUL4A-209ENST00000488558 HOXA9P31269 272 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 RPL9P32969 192 aaKnown RBP25.24■■□□□ 1.63
CUL4A-209ENST00000488558 RAB33AQ14088 237 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 MCM6Q14566 821 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 LIN9Q5TKA1 542 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 SRPRBQ9Y5M8 271 aaKnown RBP25.24■■□□□ 1.63
CUL4A-209ENST00000488558 BACE2Q9Y5Z0 518 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 MYH15Q9Y2K3 1946 aa25.24■■□□□ 1.63
CUL4A-209ENST00000488558 PODXLO00592 558 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 TBCAO75347 108 aaKnown RBP25.23■■□□□ 1.63
CUL4A-209ENST00000488558 KRT18P05783 430 aaKnown RBP25.23■■□□□ 1.63
CUL4A-209ENST00000488558 POU2F2P09086 479 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 DHX8Q14562 1220 aaKnown RBP25.23■■□□□ 1.63
CUL4A-209ENST00000488558 KYAT1Q16773 422 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 SLC10A6Q3KNW5 377 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 ANKS3Q6ZW76 656 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 RTL10Q7L3V2 364 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 MYCT1Q8N699 235 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 BICD1Q96G01 975 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 PLEKHA5Q9HAU0 1116 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 PIDD1Q9HB75 910 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 IGSF9Q9P2J2 1179 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 STK17AQ9UEE5 414 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 TBX20Q9UMR3 447 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 MTMR6Q9Y217 621 aa25.23■■□□□ 1.63
CUL4A-209ENST00000488558 K7ENM7 598 aa25.22■■□□□ 1.63
CUL4A-209ENST00000488558 HNRNPDLO14979 420 aaKnown RBP25.22■■□□□ 1.63
CUL4A-209ENST00000488558 TRAK2O60296 914 aa25.22■■□□□ 1.63
CUL4A-209ENST00000488558 N4BP1O75113 896 aaKnown RBP25.22■■□□□ 1.63
CUL4A-209ENST00000488558 CLTAP09496 248 aa25.22■■□□□ 1.63
CUL4A-209ENST00000488558 IGFBP6P24592 240 aaPredicted RBP25.22■■□□□ 1.63
CUL4A-209ENST00000488558 DDIT3P35638 169 aa25.22■■□□□ 1.63
CUL4A-209ENST00000488558 LIG4P49917 911 aa25.22■■□□□ 1.63
CUL4A-209ENST00000488558 PRRX2Q99811 253 aa25.22■■□□□ 1.63
CUL4A-209ENST00000488558 ZSCAN16Q9H4T2 348 aaPredicted RBP25.22■■□□□ 1.63
CUL4A-209ENST00000488558 EPS15L1Q9UBC2 864 aa25.22■■□□□ 1.63
CUL4A-209ENST00000488558 CCDC39Q9UFE4 941 aa25.22■■□□□ 1.63
CUL4A-209ENST00000488558 DOCK8Q8NF50 2099 aa25.21■■□□□ 1.63
CUL4A-209ENST00000488558 SYN3O14994 580 aa25.21■■□□□ 1.63
CUL4A-209ENST00000488558 ADAM12O43184 909 aa25.21■■□□□ 1.63
CUL4A-209ENST00000488558 MYBP10242 640 aa25.21■■□□□ 1.63
CUL4A-209ENST00000488558 TKTP29401 623 aaKnown RBP25.21■■□□□ 1.63
CUL4A-209ENST00000488558 BRCC3P46736 316 aa25.21■■□□□ 1.63
CUL4A-209ENST00000488558 EPSTI1Q96J88 318 aa25.21■■□□□ 1.63
CUL4A-209ENST00000488558 FIZ1Q96SL8 496 aa25.21■■□□□ 1.63
CUL4A-209ENST00000488558 HAPLN2Q9GZV7 340 aa25.21■■□□□ 1.63
CUL4A-209ENST00000488558 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.21■■□□□ 1.633e-11■□□□□ 8.3
CUL4A-209ENST00000488558 C8AP07357 584 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 MARCKSP29966 332 aaPredicted RBP25.2■■□□□ 1.62
CUL4A-209ENST00000488558 OR1D2P34982 312 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 TXLNAP40222 546 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 MATR3P43243 847 aaKnown RBP eCLIP25.2■■□□□ 1.62
CUL4A-209ENST00000488558 TDGQ13569 410 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 UVSSAQ2YD98 709 aa25.2■■□□□ 1.62
CUL4A-209ENST00000488558 PPM1LQ5SGD2 360 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms