RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 GOLGA2P5Q9HBQ8 144 aa24.75■■□□□ 1.55
PTPN4-211ENST00000488279 DUSP12Q9UNI6 340 aa24.75■■□□□ 1.55
PTPN4-211ENST00000488279 ADAM12O43184 909 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 TOM1L1O75674 476 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 BMP15O95972 392 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 HNRNPA1P09651 372 aaKnown RBP eCLIP24.74■■□□□ 1.55
PTPN4-211ENST00000488279 KCNE1P15382 129 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 OR1D2P34982 312 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 RAB33AQ14088 237 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 PPM1LQ5SGD2 360 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 CD300LGQ6UXG3 332 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 NXPE3Q969Y0 559 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 CALML4Q96GE6 196 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 ZBTB45Q96K62 511 aaPredicted RBP24.74■■□□□ 1.55
PTPN4-211ENST00000488279 SNX27Q96L92 541 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 IRF2BPLQ9H1B7 796 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 PLXNA3P51805 1871 aa24.74■■□□□ 1.55
PTPN4-211ENST00000488279 H0YCG3 227 aa24.73■■□□□ 1.55
PTPN4-211ENST00000488279 ABLIM1O14639 778 aa24.73■■□□□ 1.55
PTPN4-211ENST00000488279 C8AP07357 584 aa24.73■■□□□ 1.55
PTPN4-211ENST00000488279 MAPTP10636 758 aaKnown RBP24.73■■□□□ 1.55
PTPN4-211ENST00000488279 HARSP12081 509 aaKnown RBP24.73■■□□□ 1.55
PTPN4-211ENST00000488279 ASTLQ6HA08 431 aaPredicted RBP24.73■■□□□ 1.55
PTPN4-211ENST00000488279 BRAPQ7Z569 592 aa24.73■■□□□ 1.55
PTPN4-211ENST00000488279 ZMAT2Q96NC0 199 aaKnown RBP24.73■■□□□ 1.55
PTPN4-211ENST00000488279 LARSQ9P2J5 1176 aaKnown RBP24.73■■□□□ 1.55
PTPN4-211ENST00000488279 MTRRQ9UBK8 725 aa24.73■■□□□ 1.55
PTPN4-211ENST00000488279 FBXL21Q9UKT6 434 aa24.73■■□□□ 1.55
PTPN4-211ENST00000488279 DENND4AQ7Z401 1863 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 NPHP3-ACAD11A0A0J9YXS1 232 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 LAMP2P13473 410 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 TKTP29401 623 aaKnown RBP24.72■■□□□ 1.55
PTPN4-211ENST00000488279 RPL9P32969 192 aaKnown RBP24.72■■□□□ 1.55
PTPN4-211ENST00000488279 CLCN5P51795 746 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 SOX4Q06945 474 aaPredicted RBP24.72■■□□□ 1.55
PTPN4-211ENST00000488279 NOLC1Q14978 699 aaKnown RBP eCLIP24.72■■□□□ 1.55
PTPN4-211ENST00000488279 UVSSAQ2YD98 709 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 ARSHQ5FYA8 562 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 ZPBP2Q6X784 338 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 ANKS3Q6ZW76 656 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 GET4Q7L5D6 327 aaPredicted RBP24.72■■□□□ 1.55
PTPN4-211ENST00000488279 GRASPQ7Z6J2 395 aaPredicted RBP24.72■■□□□ 1.55
PTPN4-211ENST00000488279 C3orf58Q8NDZ4 430 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 RSAD2Q8WXG1 361 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 CNTN3Q9P232 1028 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 ANKFY1Q9P2R3 1169 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 BACE2Q9Y5Z0 518 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 CDY1Q9Y6F8 540 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 C2orf16Q68DN1 1984 aa24.72■■□□□ 1.55
PTPN4-211ENST00000488279 I3L4J1 428 aa24.71■■□□□ 1.55
PTPN4-211ENST00000488279 PODXLO00592 558 aa24.71■■□□□ 1.55
PTPN4-211ENST00000488279 CLDN3O15551 220 aa24.71■■□□□ 1.55
PTPN4-211ENST00000488279 XYLBO75191 536 aa24.71■■□□□ 1.55
PTPN4-211ENST00000488279 FSHRP23945 695 aa24.71■■□□□ 1.55
PTPN4-211ENST00000488279 HOXA9P31269 272 aa24.71■■□□□ 1.55
PTPN4-211ENST00000488279 BRCC3P46736 316 aa24.71■■□□□ 1.55
PTPN4-211ENST00000488279 AXDND1Q5T1B0 1012 aaPredicted RBP24.71■■□□□ 1.55
PTPN4-211ENST00000488279 SLC44A3Q8N4M1 653 aa24.71■■□□□ 1.55
PTPN4-211ENST00000488279 ZFP37Q9Y6Q3 630 aaPredicted RBP24.71■■□□□ 1.55
PTPN4-211ENST00000488279 LONP1P36776 959 aaKnown RBP24.7■■□□□ 1.54
PTPN4-211ENST00000488279 MATR3P43243 847 aaKnown RBP eCLIP24.7■■□□□ 1.54
PTPN4-211ENST00000488279 CACNB1Q02641 598 aaPredicted RBP24.7■■□□□ 1.54
PTPN4-211ENST00000488279 RSPO2Q6UXX9 243 aaPredicted RBP24.7■■□□□ 1.54
PTPN4-211ENST00000488279 RTL10Q7L3V2 364 aa24.7■■□□□ 1.54
PTPN4-211ENST00000488279 TMEM105Q8N8V8 129 aa24.7■■□□□ 1.54
PTPN4-211ENST00000488279 FLCNQ8NFG4 579 aa24.7■■□□□ 1.54
PTPN4-211ENST00000488279 SLC7A14Q8TBB6 771 aa24.7■■□□□ 1.54
PTPN4-211ENST00000488279 ODF2LQ9ULJ1 636 aa24.7■■□□□ 1.54
PTPN4-211ENST00000488279 POLIQ9UNA4 740 aa24.7■■□□□ 1.54
PTPN4-211ENST00000488279 CCL16O15467 120 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 GALR2O43603 387 aaPredicted RBP24.69■■□□□ 1.54
PTPN4-211ENST00000488279 NCKAP1LP55160 1127 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 MCL1Q07820 350 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 CUL4AQ13619 759 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 DHX8Q14562 1220 aaKnown RBP24.69■■□□□ 1.54
PTPN4-211ENST00000488279 SF3A1Q15459 793 aaKnown RBP24.69■■□□□ 1.54
PTPN4-211ENST00000488279 SLC10A6Q3KNW5 377 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 GPBP1Q86WP2 473 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 RASSF8Q8NHQ8 419 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 C18orf25Q96B23 403 aaPredicted RBP24.69■■□□□ 1.54
PTPN4-211ENST00000488279 BICD1Q96G01 975 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 PHOX2BQ99453 314 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 NUB1Q9Y5A7 615 aa24.69■■□□□ 1.54
PTPN4-211ENST00000488279 MTCL1Q9Y4B5 1905 aaKnown RBP24.69■■□□□ 1.54
PTPN4-211ENST00000488279 NARSO43776 548 aaKnown RBP24.68■■□□□ 1.54
PTPN4-211ENST00000488279 PDCP20941 246 aa24.68■■□□□ 1.54
PTPN4-211ENST00000488279 SCP2P22307 547 aa24.68■■□□□ 1.54
PTPN4-211ENST00000488279 SEZ6Q53EL9 994 aa24.68■■□□□ 1.54
PTPN4-211ENST00000488279 HAUS6Q7Z4H7 955 aa24.68■■□□□ 1.54
PTPN4-211ENST00000488279 SIX5Q8N196 739 aa24.68■■□□□ 1.54
PTPN4-211ENST00000488279 MYCT1Q8N699 235 aa24.68■■□□□ 1.54
PTPN4-211ENST00000488279 ATOH1Q92858 354 aaPredicted RBP24.68■■□□□ 1.54
PTPN4-211ENST00000488279 REEP2Q9BRK0 252 aa24.68■■□□□ 1.54
PTPN4-211ENST00000488279 WNT16Q9UBV4 365 aa24.68■■□□□ 1.54
PTPN4-211ENST00000488279 VPS37CA5D8V6 355 aaPredicted RBP24.67■■□□□ 1.54
PTPN4-211ENST00000488279 ANHXE9PGG2 379 aa24.67■■□□□ 1.54
PTPN4-211ENST00000488279 SYN3O14994 580 aa24.67■■□□□ 1.54
PTPN4-211ENST00000488279 MEFVO15553 781 aaPredicted RBP24.67■■□□□ 1.54
PTPN4-211ENST00000488279 POU2F2P09086 479 aa24.67■■□□□ 1.54
PTPN4-211ENST00000488279 VARS2Q5ST30 1063 aaKnown RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms