RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 GPR156Q8NFN8 814 aa3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 TTC8Q8TAM2 541 aa3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 SNX33Q8WV41 574 aa3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 KAT5Q92993 513 aa3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 GFM2Q969S9 779 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 RPL10LQ96L21 214 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 UIMC1Q96RL1 719 aa3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 GPHA2Q96T91 129 aa3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 MLST8Q9BVC4 326 aa3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 CYP4F11Q9HBI6 524 aa3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 PNMA8BQ9ULN7 279 aaPredicted RBP3.77□□□□□ -1.81
R3HDM1-219ENST00000488035 PROB1E7EW31 1015 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 AP1G1O43747 822 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 AKR1B10O60218 316 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 MFAP3LO75121 409 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 LTA4HP09960 611 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 KIR2DL3P43628 341 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 MGAT2Q10469 447 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 MAN2A1Q16706 1144 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 HTR3DQ70Z44 454 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 MIER2Q8N344 545 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 PRR18Q8N4B5 295 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 NELL1Q92832 810 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 GCDHQ92947 438 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 NUP88Q99567 741 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 MNTQ99583 582 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 TCF25Q9BQ70 676 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 ADI1Q9BV57 179 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 LDAHQ9H6V9 325 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 C14orf93Q9H972 538 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 RBM12Q9NTZ6 932 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 DDX20Q9UHI6 824 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 PCDHA13Q9Y5I0 950 aa3.76□□□□□ -1.81
R3HDM1-219ENST00000488035 RPTORQ8N122 1335 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 KLRG2A4D1S0 409 aaPredicted RBP3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 KIAA0355O15063 1070 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 DAPK3O43293 454 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 ITGA10O75578 1167 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 STC2O76061 302 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 IPO13O94829 963 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 ATF3P18847 181 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 PDCP20941 246 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 CYP2C19P33261 490 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 SREBF1P36956 1147 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 CASRP41180 1078 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 WASP42768 502 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 RABGGTBP53611 331 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 MEF2AQ02078 507 aaPredicted RBP3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 DSC2Q02487 901 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 GAGE13Q4V321 117 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 TIGD2Q4W5G0 525 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 ATAT1Q5SQI0 421 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 FKBP15Q5T1M5 1219 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 IFIT1BQ5T764 474 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 USP45Q70EL2 814 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 RD3Q7Z3Z2 195 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 ZGPATQ8N5A5 531 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 PPP1R35Q8TAP8 253 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 ATXN2LQ8WWM7 1075 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 HPS3Q969F9 1004 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 RUNDC1Q96C34 613 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 AIFM3Q96NN9 605 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 TAAR9Q96RI9 348 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 PDCD2LQ9BRP1 358 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 SYNPO2LQ9H987 977 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 PCDHB1Q9Y5F3 818 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 HS3ST4Q9Y661 456 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 ZMYM3Q14202 1370 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 COL4A3Q01955 1670 aa3.75□□□□□ -1.81
R3HDM1-219ENST00000488035 UBE2QL1A1L167 161 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 LRRC14BA6NHZ5 514 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 A6NNZ2 444 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 VSTM5A8MXK1 200 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 RECQL4O94761 1208 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 AMY1AP04745 511 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 VSIG10L2P0DP72 767 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 FPR1P21462 350 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 AKAP5P24588 427 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 PCSK1P29120 753 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 SLC16A1P53985 500 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 USP14P54578 494 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 TARDBPQ13148 414 aaKnown RBP eCLIP3.74□□□□□ -1.815e-6■■■■□ 20
R3HDM1-219ENST00000488035 GALEQ14376 348 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 C19orf54Q5BKX5 351 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 PRAMEF14Q5SWL7 426 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 CXorf57Q6NSI4 855 aaKnown RBP3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 MICALCLQ6ZW33 695 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 COL23A1Q86Y22 540 aaPredicted RBP3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 RHOT1Q8IXI2 618 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 GRAMD1CQ8IYS0 662 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 TRMT2AQ8IZ69 625 aaKnown RBP3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 SLC35G2Q8TBE7 412 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 MDM1Q8TC05 714 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 CCHCR1Q8TD31 782 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 DIS3LQ8TF46 1054 aaKnown RBP3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 ZNF480Q8WV37 535 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 STON2Q8WXE9 905 aa3.74□□□□□ -1.81
R3HDM1-219ENST00000488035 CEP95Q96GE4 821 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms