RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 CXorf57Q6NSI4 855 aaKnown RBP4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 BTNL9Q6UXG8 535 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 FMNL3Q8IVF7 1028 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 WDR75Q8IWA0 830 aaKnown RBP4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 CPA6Q8N4T0 437 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 LILRA3Q8N6C8 439 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 NDC1Q9BTX1 674 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 GREM2Q9H772 168 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 TCF7L1Q9HCS4 588 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 AKIP1Q9NQ31 210 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 DNM3Q9UQ16 869 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 INSL6Q9Y581 213 aa4.87□□□□□ -1.63
HMGB1P36-201ENST00000487709 TMEM200CA6NKL6 621 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 NDUFS2O75306 463 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 RFPL1O75677 317 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 SEC24DO94855 1032 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 ENDOD1O94919 500 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 NDUFA10O95299 355 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 SCGB1D2O95969 90 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 LTA4HP09960 611 aaKnown RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 PF4V1P10720 104 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 HSPA6P17066 643 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 ITGB6P18564 788 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 ECHS1P30084 290 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 PLA2G5P39877 138 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 WNT3AP56704 352 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 KIF23Q02241 960 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 TRIM25Q14258 630 aaKnown RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 NFE2Q16621 373 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 ZNF362Q5T0B9 420 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 KCNK18Q7Z418 384 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 GDF7Q7Z4P5 450 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 GLB1L3Q8NCI6 653 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 OR52N2Q8NGI0 321 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 OR5M3Q8NGP4 307 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 JPH3Q8WXH2 748 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 RBM12Q9NTZ6 932 aaKnown RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 CHPF2Q9P2E5 772 aa4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 TESQ9UGI8 421 aaKnown RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 EVLQ9UI08 416 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 THRAP3Q9Y2W1 955 aaKnown RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 EPN1Q9Y6I3 576 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P36-201ENST00000487709 UNC119BA6NIH7 251 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 RNASET2O00584 256 aaKnown RBP4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 TSPAN6O43657 245 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 AKR1B10O60218 316 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 OFD1O75665 1012 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 ABLIM3O94929 683 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 ATF3P18847 181 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 AKAP5P24588 427 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 CXCR5P32302 372 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 CASRP41180 1078 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 CCT2P78371 535 aaKnown RBP4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 ADRM1Q16186 407 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 ERCC6LQ2NKX8 1250 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 PRR16Q569H4 304 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 PDZD4Q76G19 769 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 FAM83AQ86UY5 434 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 ARHGEF19Q8IW93 802 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 MYO1HQ8N1T3 1032 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 BOLLQ8N9W6 283 aaKnown RBP4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 TSPEARQ8WU66 669 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 ZNF480Q8WV37 535 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 JADE3Q92613 823 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 HDAC10Q969S8 669 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 C7orf25Q9BPX7 421 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 MANSC1Q9H8J5 431 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 NMRK2Q9NPI5 230 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 SYBUQ9NX95 663 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 TMPRSS11EQ9UL52 423 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 HDAC5Q9UQL6 1122 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 PCDHGA2Q9Y5H1 932 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 RPTORQ8N122 1335 aa4.85□□□□□ -1.63
HMGB1P36-201ENST00000487709 LEFTY2O00292 366 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 PARNO95453 639 aaKnown RBP4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 GAAP10253 952 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 SEC24CP53992 1094 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 PER3P56645 1201 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 FOXI1Q12951 378 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 GTF2H3Q13889 308 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 ATP2B3Q16720 1220 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 GFOD2Q3B7J2 385 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 MINDY4Q4G0A6 757 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 IFIT1BQ5T764 474 aaKnown RBP4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 FAM102BQ5T8I3 360 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 THEMIS2Q5TEJ8 643 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 NXNQ6DKJ4 435 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 NOL8Q76FK4 1167 aaKnown RBP4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 XYLT1Q86Y38 959 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 PPM1NQ8N819 430 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 AIFM3Q96NN9 605 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 UHRF1Q96T88 793 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 SPATA5L1Q9BVQ7 753 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 ENKD1Q9H0I2 346 aa4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 GEMIN8Q9NWZ8 242 aaKnown RBP4.84□□□□□ -1.63
HMGB1P36-201ENST00000487709 FZD9O00144 591 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 KIF3BO15066 747 aa4.83□□□□□ -1.64
HMGB1P36-201ENST00000487709 ERC2O15083 957 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms