RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 GNAT1P11488 350 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 DARSP14868 501 aaKnown RBP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 HOXD10P28358 340 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 HOXA11P31270 313 aaPredicted RBP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 CASQ1P31415 396 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 GTF2F1P35269 517 aaKnown RBP eCLIP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 BIRC3Q13489 604 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 NAB2Q15742 525 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 KYAT1Q16773 422 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 C10orf76Q5T2E6 689 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 CCSAPQ6IQ19 270 aaPredicted RBP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 CXCL17Q6UXB2 119 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 VPS36Q86VN1 386 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 ZNF710Q8N1W2 664 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 KLHDC9Q8NEP7 349 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 DNAJB3Q8WWF6 145 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 OSMRQ99650 979 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 MTMR12Q9C0I1 747 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 SPC25Q9HBM1 224 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 LUC7LQ9NQ29 371 aaKnown RBP10.18□□□□□ -0.78
SF3B1-211ENST00000487698 XPNPEP3Q9NQH7 507 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.18□□□□□ -0.788e-7■■■■■ 27.9
SF3B1-211ENST00000487698 GTF2IRD1Q9UHL9 959 aa10.18□□□□□ -0.78
SF3B1-211ENST00000487698 STAG3L1P0CL83 205 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 FGFR4P22455 802 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 YY1P25490 414 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 OSTNP61366 133 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 NCOA4Q13772 614 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 NBPF20Q3BBV1 942 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 SCARA3Q6AZY7 606 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 EPS8L1Q8TE68 723 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 PXYLP1Q8TE99 480 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 TMEM40Q8WWA1 233 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 ELMO3Q96BJ8 720 aa10.17□□□□□ -0.78
SF3B1-211ENST00000487698 RPF1Q9H9Y2 349 aaKnown RBP10.17□□□□□ -0.78
SF3B1-211ENST00000487698 APOBEC3GQ9HC16 384 aaKnown RBP10.17□□□□□ -0.78
SF3B1-211ENST00000487698 NOCTQ9UK39 431 aaKnown RBP10.17□□□□□ -0.78
SF3B1-211ENST00000487698 BTNL10A8MVZ5 291 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
SF3B1-211ENST00000487698 ASS1P00966 412 aaKnown RBP10.16□□□□□ -0.78
SF3B1-211ENST00000487698 EIF4BP23588 611 aaKnown RBP10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SNX17Q15036 470 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 DUOXA2Q1HG44 320 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 DCAF4L1Q3SXM0 396 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 WDR44Q5JSH3 913 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 TAF2Q6P1X5 1199 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 ALKBH5Q6P6C2 394 aaKnown RBP10.16□□□□□ -0.78
SF3B1-211ENST00000487698 TRAPPC11Q7Z392 1133 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SESTD1Q86VW0 696 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 GLYCTKQ8IVS8 523 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 NME8Q8N427 588 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 DHX38Q92620 1227 aaKnown RBP10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SECISBP2LQ93073 1101 aaKnown RBP10.16□□□□□ -0.78
SF3B1-211ENST00000487698 ARID3AQ99856 593 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 PACSIN1Q9BY11 444 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SALL4Q9UJQ4 1053 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 MACROD2A1Z1Q3 448 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 ASGR1P07306 291 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 ACO1P21399 889 aaKnown RBP10.16□□□□□ -0.78
SF3B1-211ENST00000487698 GRM5P41594 1212 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 NOP14P78316 857 aaKnown RBP10.16□□□□□ -0.78
SF3B1-211ENST00000487698 CUL2Q13617 745 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SLC10A6Q3KNW5 377 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SPOPLQ6IQ16 392 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SLC27A1Q6PCB7 646 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 CATSPER4Q7RTX7 472 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SLC20A1Q8WUM9 679 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 ERO1AQ96HE7 468 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 AGPAT1Q99943 283 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 ADPGKQ9BRR6 497 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 ASB7Q9H672 318 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 SAGE1Q9NXZ1 904 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 INTUQ9ULD6 942 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 GINS2Q9Y248 185 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 NUB1Q9Y5A7 615 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 CAPN6Q9Y6Q1 641 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 MROH7Q68CQ1 1323 aa10.16□□□□□ -0.78
SF3B1-211ENST00000487698 UQCRHLA0A096LP55 91 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 CTAGE9A4FU28 777 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 LACTBL1A8MY62 500 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 CYP26A1O43174 497 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 CTIFO43310 598 aaKnown RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 SGPL1O95470 568 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 CST3P01034 146 aaPredicted RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 UQCRHP07919 91 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 NFICP08651 508 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 CHRNB2P17787 502 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 TBXAS1P24557 533 aaPredicted RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 AXLP30530 894 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 CRYBB1P53674 252 aaPredicted RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 HTRA3P83110 453 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 AMPD2Q01433 879 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 GDF6Q6KF10 455 aaPredicted RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 NOP9Q86U38 636 aaKnown RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 SERINC5Q86VE9 423 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 SLC47A2Q86VL8 602 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 PALB2Q86YC2 1186 aa10.15□□□□□ -0.78
SF3B1-211ENST00000487698 RNF10Q8N5U6 811 aaKnown RBP10.15□□□□□ -0.78
SF3B1-211ENST00000487698 UBR7Q8N806 425 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms