RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 MYH11P35749 1972 aa25.82■■□□□ 1.72
PLOD3-215ENST00000487563 N4BP1O75113 896 aaKnown RBP25.82■■□□□ 1.72
PLOD3-215ENST00000487563 TOM1L1O75674 476 aa25.82■■□□□ 1.72
PLOD3-215ENST00000487563 FGFR3P22607 806 aa25.82■■□□□ 1.72
PLOD3-215ENST00000487563 PROZP22891 400 aa25.82■■□□□ 1.72
PLOD3-215ENST00000487563 MATR3P43243 847 aaKnown RBP eCLIP25.82■■□□□ 1.72
PLOD3-215ENST00000487563 NOLC1Q14978 699 aaKnown RBP eCLIP25.82■■□□□ 1.72
PLOD3-215ENST00000487563 PPM1LQ5SGD2 360 aa25.82■■□□□ 1.72
PLOD3-215ENST00000487563 TMEM161BQ8NDZ6 487 aa25.82■■□□□ 1.72
PLOD3-215ENST00000487563 BICD1Q96G01 975 aa25.82■■□□□ 1.72
PLOD3-215ENST00000487563 DDX27Q96GQ7 796 aaKnown RBP25.82■■□□□ 1.72
PLOD3-215ENST00000487563 NPHP3-ACAD11A0A0J9YXS1 232 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 H0YCG3 227 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 C8AP07357 584 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 MAPTP10636 758 aaKnown RBP25.81■■□□□ 1.72
PLOD3-215ENST00000487563 SOX4Q06945 474 aaPredicted RBP25.81■■□□□ 1.72
PLOD3-215ENST00000487563 DHX8Q14562 1220 aaKnown RBP25.81■■□□□ 1.72
PLOD3-215ENST00000487563 XKR4Q5GH76 650 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 GPBP1Q86WP2 473 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 ZBTB45Q96K62 511 aaPredicted RBP25.81■■□□□ 1.72
PLOD3-215ENST00000487563 MYADMQ96S97 322 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 FBXL21Q9UKT6 434 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 DUSP12Q9UNI6 340 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 TRIP11Q15643 1979 aa25.81■■□□□ 1.72
PLOD3-215ENST00000487563 I3L4J1 428 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 PODXLO00592 558 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 ABLIM1O14639 778 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 ADAM12O43184 909 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 PAPLNO95428 1278 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 HNRNPA1P09651 372 aaKnown RBP eCLIP25.8■■□□□ 1.72
PLOD3-215ENST00000487563 TKTP29401 623 aaKnown RBP25.8■■□□□ 1.72
PLOD3-215ENST00000487563 OR1D2P34982 312 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 BRCC3P46736 316 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 ALKAL1Q6UXT8 129 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 ZPBP2Q6X784 338 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 ANKS3Q6ZW76 656 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 C3orf58Q8NDZ4 430 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.8■■□□□ 1.72
PLOD3-215ENST00000487563 CNTN3Q9P232 1028 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 EPS15L1Q9UBC2 864 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 MTRRQ9UBK8 725 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 ODF2LQ9ULJ1 636 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 POLIQ9UNA4 740 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 VWA8A3KMH1 1905 aa25.8■■□□□ 1.72
PLOD3-215ENST00000487563 CLDN3O15551 220 aa25.79■■□□□ 1.72
PLOD3-215ENST00000487563 KRT18P05783 430 aaKnown RBP25.79■■□□□ 1.72
PLOD3-215ENST00000487563 KCNE1P15382 129 aa25.79■■□□□ 1.72
PLOD3-215ENST00000487563 PDCP20941 246 aa25.79■■□□□ 1.72
PLOD3-215ENST00000487563 IGFBP6P24592 240 aaPredicted RBP25.79■■□□□ 1.72
PLOD3-215ENST00000487563 LONP1P36776 959 aaKnown RBP25.79■■□□□ 1.72
PLOD3-215ENST00000487563 MRE11P49959 708 aa25.79■■□□□ 1.72
PLOD3-215ENST00000487563 RAB33AQ14088 237 aa25.79■■□□□ 1.72
PLOD3-215ENST00000487563 SF3A1Q15459 793 aaKnown RBP25.79■■□□□ 1.72
PLOD3-215ENST00000487563 ZMAT2Q96NC0 199 aaKnown RBP25.79■■□□□ 1.72
PLOD3-215ENST00000487563 REEP2Q9BRK0 252 aa25.79■■□□□ 1.72
PLOD3-215ENST00000487563 NUB1Q9Y5A7 615 aa25.79■■□□□ 1.72
PLOD3-215ENST00000487563 CDY1Q9Y6F8 540 aa25.79■■□□□ 1.72
PLOD3-215ENST00000487563 CITO14578 2027 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 CCL16O15467 120 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 XYLBO75191 536 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 FAM13AO94988 1023 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 FSHRP23945 695 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 SEZ6Q53EL9 994 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 ARSHQ5FYA8 562 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 GRASPQ7Z6J2 395 aaPredicted RBP25.78■■□□□ 1.72
PLOD3-215ENST00000487563 SLC7A14Q8TBB6 771 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 RSAD2Q8WXG1 361 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 WDFY4Q6ZS81 3184 aa25.78■■□□□ 1.72
PLOD3-215ENST00000487563 PIEZO1Q92508 2521 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 PLCG1P19174 1290 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 HOXA9P31269 272 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 NCKAP1LP55160 1127 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 TCF15Q12870 199 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 CUL4AQ13619 759 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 KARSQ15046 597 aaKnown RBP25.77■■□□□ 1.72
PLOD3-215ENST00000487563 AXDND1Q5T1B0 1012 aaPredicted RBP25.77■■□□□ 1.72
PLOD3-215ENST00000487563 CD300LGQ6UXG3 332 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 HAUS6Q7Z4H7 955 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 MYCT1Q8N699 235 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 FLCNQ8NFG4 579 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 C18orf25Q96B23 403 aaPredicted RBP25.77■■□□□ 1.72
PLOD3-215ENST00000487563 ZHX3Q9H4I2 956 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 BACE2Q9Y5Z0 518 aa25.77■■□□□ 1.72
PLOD3-215ENST00000487563 K7ENM7 598 aa25.76■■□□□ 1.71
PLOD3-215ENST00000487563 TBCAO75347 108 aaKnown RBP25.76■■□□□ 1.71
PLOD3-215ENST00000487563 RPL9P32969 192 aaKnown RBP25.76■■□□□ 1.71
PLOD3-215ENST00000487563 LIG4P49917 911 aa25.76■■□□□ 1.71
PLOD3-215ENST00000487563 NUBP1P53384 320 aa25.76■■□□□ 1.71
PLOD3-215ENST00000487563 MCL1Q07820 350 aa25.76■■□□□ 1.71
PLOD3-215ENST00000487563 ASTLQ6HA08 431 aaPredicted RBP25.76■■□□□ 1.71
PLOD3-215ENST00000487563 RAD54LQ92698 747 aa25.76■■□□□ 1.71
PLOD3-215ENST00000487563 NXPE3Q969Y0 559 aa25.76■■□□□ 1.71
PLOD3-215ENST00000487563 PARVGQ9HBI0 331 aa25.76■■□□□ 1.71
PLOD3-215ENST00000487563 HNRNPDLO14979 420 aaKnown RBP25.75■■□□□ 1.71
PLOD3-215ENST00000487563 NARSO43776 548 aaKnown RBP25.75■■□□□ 1.71
PLOD3-215ENST00000487563 LAMP2P13473 410 aa25.75■■□□□ 1.71
PLOD3-215ENST00000487563 GRIN1Q05586 938 aa25.75■■□□□ 1.71
PLOD3-215ENST00000487563 MCM6Q14566 821 aa25.75■■□□□ 1.71
PLOD3-215ENST00000487563 TMEM105Q8N8V8 129 aa25.75■■□□□ 1.71
PLOD3-215ENST00000487563 IRF2BPLQ9H1B7 796 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms