RNA–Protein interactions for RNA: ENST00000487508.5

SFXN5-218, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 507 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-218ENST00000487508 TRIP11Q15643 1979 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 TTC26A0AVF1 554 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 LRRIQ3A6PVS8 624 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-218ENST00000487508 PES1O00541 588 aaKnown RBP11.89□□□□□ -0.51
SFXN5-218ENST00000487508 EOMESO95936 686 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 TPM2P07951 284 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 NFICP08651 508 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 FGFR1P11362 822 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 WDR5P61964 334 aaKnown RBP11.89□□□□□ -0.51
SFXN5-218ENST00000487508 DLG4P78352 724 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 FAM189BP81408 668 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 DEFB103AP81534 67 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 SURF1Q15526 300 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 MAN2A1Q16706 1144 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 GLRA4Q5JXX5 417 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 LMBRD2Q68DH5 695 aaPredicted RBP11.89□□□□□ -0.51
SFXN5-218ENST00000487508 USP37Q86T82 979 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 TRIM59Q8IWR1 403 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 HELQQ8TDG4 1101 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 PARD3BQ8TEW8 1205 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 FAM84AQ96KN4 292 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 ZFP42Q96MM3 310 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 GAD1Q99259 594 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 CGRRF1Q99675 332 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 TUBGCP2Q9BSJ2 902 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 CXCL16Q9H2A7 254 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 ELAC1Q9H777 363 aaKnown RBP11.89□□□□□ -0.51
SFXN5-218ENST00000487508 RNF19AQ9NV58 838 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 LIMA1Q9UHB6 759 aaKnown RBP11.89□□□□□ -0.51
SFXN5-218ENST00000487508 GIT1Q9Y2X7 761 aa11.89□□□□□ -0.51
SFXN5-218ENST00000487508 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.89□□□□□ -0.51
SFXN5-218ENST00000487508 PTPRJQ12913 1337 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 TTC3P53804 2025 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 GOLGA6L3A6NEY3 463 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 UPP2O95045 317 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 SERPINC1P01008 464 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 FOSL2P15408 326 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 TNNI1P19237 187 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 GATMP50440 423 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 SCNN1GP51170 649 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 COPB1P53618 953 aaKnown RBP11.88□□□□□ -0.51
SFXN5-218ENST00000487508 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
SFXN5-218ENST00000487508 FANCCQ00597 558 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 POU5F1Q01860 360 aaKnown RBP11.88□□□□□ -0.51
SFXN5-218ENST00000487508 TMEM132DQ14C87 1099 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 CLLU1OSQ5K130 101 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 C1orf220Q5T0J3 134 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 JADE1Q6IE81 842 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 GLB1LQ6UWU2 654 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 WDR49Q8IV35 697 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 CD302Q8IX05 232 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 EFCAB13Q8IY85 973 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 SLC35C1Q96A29 364 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 KIF12Q96FN5 646 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 POP1Q99575 1024 aaKnown RBP11.88□□□□□ -0.51
SFXN5-218ENST00000487508 VPS16Q9H269 839 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 ASB7Q9H672 318 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 PLEKHA5Q9HAU0 1116 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 UBN1Q9NPG3 1134 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 RNF216Q9NWF9 866 aaPredicted RBP11.88□□□□□ -0.51
SFXN5-218ENST00000487508 CNTN3Q9P232 1028 aa11.88□□□□□ -0.51
SFXN5-218ENST00000487508 TDRD15B5MCY1 1934 aaKnown RBP11.88□□□□□ -0.51
SFXN5-218ENST00000487508 PTGESO14684 152 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 HOXA2O43364 376 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 STX10O60499 249 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 POMCP01189 267 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 AFPP02771 609 aaKnown RBP11.87□□□□□ -0.51
SFXN5-218ENST00000487508 TMEM191BP0C7N4 346 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 GCLMP48507 274 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 MXI1P50539 228 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 AFF1P51825 1210 aaKnown RBP11.87□□□□□ -0.51
SFXN5-218ENST00000487508 MYL7Q01449 175 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 ENPEPQ07075 957 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 PPP3CAQ08209 521 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 VWA3BQ502W6 1294 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 FAM117BQ6P1L5 589 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 APTXQ7Z2E3 356 aaKnown RBP11.87□□□□□ -0.51
SFXN5-218ENST00000487508 TMCO2Q7Z6W1 182 aaPredicted RBP11.87□□□□□ -0.51
SFXN5-218ENST00000487508 ABI1Q8IZP0 508 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 OR5B17Q8NGF7 314 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 URGCPQ8TCY9 931 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 MYLIPQ8WY64 445 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 HERVK_113Q902F9 699 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 ZMAT2Q96NC0 199 aaKnown RBP11.87□□□□□ -0.51
SFXN5-218ENST00000487508 MTMR12Q9C0I1 747 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 MTIF3Q9H2K0 278 aaKnown RBP11.87□□□□□ -0.51
SFXN5-218ENST00000487508 TUBGCP4Q9UGJ1 667 aa11.87□□□□□ -0.51
SFXN5-218ENST00000487508 FNDC1Q4ZHG4 1894 aaPredicted RBP11.87□□□□□ -0.51
SFXN5-218ENST00000487508 SMIM28A0A1B0GU29 152 aa11.86□□□□□ -0.51
SFXN5-218ENST00000487508 OFD1O75665 1012 aa11.86□□□□□ -0.51
SFXN5-218ENST00000487508 TNNC2P02585 160 aa11.86□□□□□ -0.51
SFXN5-218ENST00000487508 KCNE1P15382 129 aa11.86□□□□□ -0.51
SFXN5-218ENST00000487508 GUCY2FP51841 1108 aa11.86□□□□□ -0.51
SFXN5-218ENST00000487508 KCNH2Q12809 1159 aa11.86□□□□□ -0.51
SFXN5-218ENST00000487508 BIRC3Q13489 604 aa11.86□□□□□ -0.51
SFXN5-218ENST00000487508 GSE1Q14687 1217 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms