RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 FBXO34Q9NWN3 711 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 TRPM5Q9NZQ8 1165 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.51□□□□□ -1.53
LINC00888-204ENST00000487386 FZD1Q9UP38 647 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 HS3ST3A1Q9Y663 406 aa5.51□□□□□ -1.53
LINC00888-204ENST00000487386 GAGE12BA1L429 117 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 GAGE12HA6NDE8 117 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 CYR61O00622 381 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 FSHBP01225 129 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 RAP2BP61225 183 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 DSC2Q02487 901 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 PDCD4Q53EL6 469 aaKnown RBP5.5□□□□□ -1.53
LINC00888-204ENST00000487386 ZNF529Q6P280 563 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 ZBTB46Q86UZ6 589 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 ZFPM1Q8IX07 1006 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 RHOT2Q8IXI1 618 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 NSUN6Q8TEA1 469 aaKnown RBP5.5□□□□□ -1.53
LINC00888-204ENST00000487386 HAS1Q92839 578 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 MYEOVQ96EZ4 313 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 TDP1Q9NUW8 608 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 HS3ST4Q9Y661 456 aa5.5□□□□□ -1.53
LINC00888-204ENST00000487386 MARCH11A6NNE9 402 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 ALDH1L1O75891 902 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 MAKP20794 623 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 MCM7P33993 719 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 PTGS2P35354 604 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 GDF5P43026 501 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 MCL1Q07820 350 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 ABHD18Q0P651 414 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 UAP1L1Q3KQV9 507 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 MED25Q71SY5 747 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 PRR18Q8N4B5 295 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 KAT5Q92993 513 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 RAB24Q969Q5 203 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 NRDE2Q9H7Z3 1164 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 AKIP1Q9NQ31 210 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 CALCOCO1Q9P1Z2 691 aa5.49□□□□□ -1.53
LINC00888-204ENST00000487386 RUVBL1Q9Y265 456 aaKnown RBP5.49□□□□□ -1.53
LINC00888-204ENST00000487386 LUC7L2Q9Y383 392 aaKnown RBP5.49□□□□□ -1.53
LINC00888-204ENST00000487386 CFAP20Q9Y6A4 193 aaKnown RBP5.49□□□□□ -1.53
LINC00888-204ENST00000487386 TMEM200CA6NKL6 621 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 RNASET2O00584 256 aaKnown RBP5.48□□□□□ -1.53
LINC00888-204ENST00000487386 RPS6KA4O75676 772 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 NCR1O76036 304 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 ABLIM3O94929 683 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 PRSS23O95084 383 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 ITGB1P05556 798 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 GCSHP23434 173 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 SLC6A2P23975 617 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 TLE1Q04724 770 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 RAB39AQ14964 217 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 TTF1Q15361 905 aaPredicted RBP5.48□□□□□ -1.53
LINC00888-204ENST00000487386 BEAN1Q3B7T3 259 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 PPP4R3AQ6IN85 833 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 Q6ZPA2 131 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 LRRC55Q6ZSA7 311 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 USP51Q70EK9 711 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 UBE3BQ7Z3V4 1068 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 RSPH3Q86UC2 560 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 ULK2Q8IYT8 1036 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 MIER2Q8N344 545 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 AMER2Q8N7J2 671 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 LARP4BQ92615 738 aaKnown RBP5.48□□□□□ -1.53
LINC00888-204ENST00000487386 CLIP3Q96DZ5 547 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 HOOK2Q96ED9 719 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 TMX3Q96JJ7 454 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 CLPTM1LQ96KA5 538 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 FAM193BQ96PV7 902 aaPredicted RBP5.48□□□□□ -1.53
LINC00888-204ENST00000487386 C11orf54Q9H0W9 315 aaPredicted RBP5.48□□□□□ -1.53
LINC00888-204ENST00000487386 PCED1AQ9H1Q7 454 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 KLHL11Q9NVR0 708 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 REXO2Q9Y3B8 237 aaKnown RBP5.48□□□□□ -1.53
LINC00888-204ENST00000487386 USP15Q9Y4E8 981 aaPredicted RBP5.48□□□□□ -1.53
LINC00888-204ENST00000487386 NISCHQ9Y2I1 1504 aa5.48□□□□□ -1.53
LINC00888-204ENST00000487386 TCRBV7S2A1N4TA0A589 114 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 PPFIA4O75335 1185 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 SLPIP03973 132 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 ALAS1P13196 640 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 LAG3P18627 525 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 PDCP20941 246 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 SLC6A4P31645 630 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 BMPR1AP36894 532 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 ZNF280AP59817 542 aaPredicted RBP5.47□□□□□ -1.53
LINC00888-204ENST00000487386 KLF10Q13118 480 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 TTC7BQ86TV6 843 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 IL17RDQ8NFM7 739 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 HSPBAP1Q96EW2 488 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 PHACTR3Q96KR7 559 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 NUP88Q99567 741 aaPredicted RBP5.47□□□□□ -1.53
LINC00888-204ENST00000487386 GSTO2Q9H4Y5 243 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 AASDHPPTQ9NRN7 309 aa5.47□□□□□ -1.53
LINC00888-204ENST00000487386 CENPVL1A0A0U1RR11 272 aa5.46□□□□□ -1.54
LINC00888-204ENST00000487386 CFIP05156 583 aa5.46□□□□□ -1.54
LINC00888-204ENST00000487386 RPLP2P05387 115 aaKnown RBP5.46□□□□□ -1.54
LINC00888-204ENST00000487386 ELANEP08246 267 aa5.46□□□□□ -1.54
LINC00888-204ENST00000487386 POU2F2P09086 479 aa5.46□□□□□ -1.54
LINC00888-204ENST00000487386 SBK3P0C264 359 aa5.46□□□□□ -1.54
LINC00888-204ENST00000487386 SPATA31D3P0C874 917 aa5.46□□□□□ -1.54
LINC00888-204ENST00000487386 AKAP5P24588 427 aa5.46□□□□□ -1.54
LINC00888-204ENST00000487386 FXR1P51114 621 aaKnown RBP eCLIP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms