RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 MTUS1Q9ULD2 1270 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 FZD1Q9UP38 647 aa27.95■■■□□ 2.07
HLA-C-208ENST00000487245 MYH9P35579 1960 aaKnown RBP27.95■■■□□ 2.06
HLA-C-208ENST00000487245 FSBPO95073 299 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 PIGRP01833 764 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 CDR1P51861 262 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 MAGOHP61326 146 aaKnown RBP27.95■■■□□ 2.06
HLA-C-208ENST00000487245 BYSLQ13895 437 aaKnown RBP27.95■■■□□ 2.06
HLA-C-208ENST00000487245 ARMC9Q7Z3E5 817 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 SLC13A5Q86YT5 568 aaPredicted RBP27.95■■■□□ 2.06
HLA-C-208ENST00000487245 C18orf8Q96DM3 657 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 NUP85Q9BW27 656 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 PORCNQ9H237 461 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 C1orf112Q9NSG2 853 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 BCCIPQ9P287 314 aaKnown RBP eCLIP27.95■■■□□ 2.06
HLA-C-208ENST00000487245 SNX24Q9Y343 169 aa27.95■■■□□ 2.06
HLA-C-208ENST00000487245 NAMPTP43490 491 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 FNTAP49354 379 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 LIG3P49916 1009 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 BPIFB4P59827 614 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 ODF2Q5BJF6 829 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 AADACL2Q6P093 401 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 TTC27Q6P3X3 843 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 ZNF677Q86XU0 584 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 ZDHHC14Q8IZN3 488 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 ANKRD35Q8N283 1001 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 OTUD6BQ8N6M0 293 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 PSPC1Q8WXF1 523 aaKnown RBP27.94■■■□□ 2.06
HLA-C-208ENST00000487245 DDX1Q92499 740 aaKnown RBP27.94■■■□□ 2.06
HLA-C-208ENST00000487245 TATDN2Q93075 761 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 ZNF653Q96CK0 615 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 CYFIP2Q96F07 1278 aa27.94■■■□□ 2.06
HLA-C-208ENST00000487245 NIFKQ9BYG3 293 aaKnown RBP27.94■■■□□ 2.06
HLA-C-208ENST00000487245 DHX33Q9H6R0 707 aaKnown RBP27.94■■■□□ 2.06
HLA-C-208ENST00000487245 MTRF1LQ9UGC7 380 aaKnown RBP27.94■■■□□ 2.06
HLA-C-208ENST00000487245 TMEM110-MUSTN1A8MSY1 372 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 LDHAP00338 332 aaKnown RBP27.93■■■□□ 2.06
HLA-C-208ENST00000487245 SP2Q02086 613 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 SIX1Q15475 284 aaPredicted RBP27.93■■■□□ 2.06
HLA-C-208ENST00000487245 WDR44Q5JSH3 913 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 CYFIP1Q7L576 1253 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 FBXO25Q8TCJ0 367 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 FNBP1Q96RU3 617 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.93■■■□□ 2.06
HLA-C-208ENST00000487245 TELO2Q9Y4R8 837 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 DOCK5Q9H7D0 1870 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 SSC5DA1L4H1 1573 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 PYGMP11217 842 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 RFC5P40937 340 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 PLTPP55058 493 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 DRP2Q13474 957 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 GPC2Q8N158 579 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 SLCO2A1Q92959 643 aa27.93■■■□□ 2.06
HLA-C-208ENST00000487245 PPANQ9NQ55 473 aaKnown RBP27.93■■■□□ 2.06
HLA-C-208ENST00000487245 IGKV6D-21A0A0A0MT36 114 aa27.92■■■□□ 2.06
HLA-C-208ENST00000487245 USP2O75604 605 aaPredicted RBP27.92■■■□□ 2.06
HLA-C-208ENST00000487245 ATP4AP20648 1035 aa27.92■■■□□ 2.06
HLA-C-208ENST00000487245 ARL2P36404 184 aa27.92■■■□□ 2.06
HLA-C-208ENST00000487245 COILP38432 576 aaPredicted RBP27.92■■■□□ 2.06
HLA-C-208ENST00000487245 RPL21P46778 160 aaKnown RBP27.92■■■□□ 2.06
HLA-C-208ENST00000487245 CLEC16AQ2KHT3 1053 aa27.92■■■□□ 2.06
HLA-C-208ENST00000487245 DENND2CQ68D51 928 aa27.92■■■□□ 2.06
HLA-C-208ENST00000487245 CCDC137Q6PK04 289 aaKnown RBP27.92■■■□□ 2.06
HLA-C-208ENST00000487245 LBX2Q6XYB7 198 aa27.92■■■□□ 2.06
HLA-C-208ENST00000487245 DEPTORQ8TB45 409 aa27.92■■■□□ 2.06
HLA-C-208ENST00000487245 NRBP2Q9NSY0 501 aa27.92■■■□□ 2.06
HLA-C-208ENST00000487245 AGO2Q9UKV8 859 aaKnown RBP27.92■■■□□ 2.06
HLA-C-208ENST00000487245 KRT5P13647 590 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 ALDH5A1P51649 535 aaPredicted RBP27.91■■■□□ 2.06
HLA-C-208ENST00000487245 RWDD2BP57060 319 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 RIOX2Q8IUF8 465 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 RAPGEF5Q92565 580 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 RNF25Q96BH1 459 aaPredicted RBP27.91■■■□□ 2.06
HLA-C-208ENST00000487245 LCTP09848 1927 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 GRIN3BO60391 1043 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 SLMAPQ14BN4 828 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 ZACNQ401N2 412 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 SLC7A3Q8WY07 619 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 ART4Q93070 314 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 TRIM11Q96F44 468 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 TMEM134Q9H6X4 195 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 LRRC19Q9H756 370 aa27.91■■■□□ 2.06
HLA-C-208ENST00000487245 K7ERI5 159 aa27.9■■■□□ 2.06
HLA-C-208ENST00000487245 SPOPO43791 374 aa27.9■■■□□ 2.06
HLA-C-208ENST00000487245 TMOD1P28289 359 aa27.9■■■□□ 2.06
HLA-C-208ENST00000487245 ZNF516Q92618 1163 aa27.9■■■□□ 2.06
HLA-C-208ENST00000487245 SGIP1Q9BQI5 828 aa27.9■■■□□ 2.06
HLA-C-208ENST00000487245 PPME1Q9Y570 386 aa27.9■■■□□ 2.06
HLA-C-208ENST00000487245 PCDHB2Q9Y5E7 798 aa27.9■■■□□ 2.06
HLA-C-208ENST00000487245 WDR90Q96KV7 1748 aa27.9■■■□□ 2.06
HLA-C-208ENST00000487245 PASKQ96RG2 1323 aa27.89■■■□□ 2.06
HLA-C-208ENST00000487245 DCDC2CA8MYV0 355 aa27.89■■■□□ 2.06
HLA-C-208ENST00000487245 CAND2O75155 1236 aa27.89■■■□□ 2.06
HLA-C-208ENST00000487245 C4BPAP04003 597 aaKnown RBP27.89■■■□□ 2.06
HLA-C-208ENST00000487245 MYBL1P10243 752 aa27.89■■■□□ 2.06
HLA-C-208ENST00000487245 GLRA2P23416 452 aa27.89■■■□□ 2.06
HLA-C-208ENST00000487245 TMEM143Q96AN5 459 aa27.89■■■□□ 2.06
HLA-C-208ENST00000487245 PLVAPQ9BX97 442 aa27.89■■■□□ 2.06
HLA-C-208ENST00000487245 ACP6Q9NPH0 428 aa27.89■■■□□ 2.06
HLA-C-208ENST00000487245 AVENQ9NQS1 362 aaPredicted RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms