RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 GPBP1Q86WP2 473 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 GLYCTKQ8IVS8 523 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 RASSF8Q8NHQ8 419 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 LRRC15Q8TF66 581 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 RAD54LQ92698 747 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 REEP2Q9BRK0 252 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 WDR6Q9NNW5 1121 aaKnown RBP20.89■□□□□ 0.93
CLIP2-206ENST00000487091 CNTN3Q9P232 1028 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 CLIC4Q9Y696 253 aa20.89■□□□□ 0.93
CLIP2-206ENST00000487091 CLDN3O15551 220 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 ZNF131P52739 623 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 CACNB1Q02641 598 aaPredicted RBP20.88■□□□□ 0.93
CLIP2-206ENST00000487091 MCL1Q07820 350 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 RESTQ13127 1097 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 MCM6Q14566 821 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 HAUS6Q7Z4H7 955 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 SMG7Q92540 1137 aaKnown RBP20.88■□□□□ 0.93
CLIP2-206ENST00000487091 STAMQ92783 540 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 ZNF707Q96C28 371 aaPredicted RBP20.88■□□□□ 0.93
CLIP2-206ENST00000487091 ZMAT2Q96NC0 199 aaKnown RBP20.88■□□□□ 0.93
CLIP2-206ENST00000487091 PRKD2Q9BZL6 878 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 GOLGA2P5Q9HBQ8 144 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 ZDBF2Q9HCK1 2354 aa20.88■□□□□ 0.93
CLIP2-206ENST00000487091 ZMYND10O75800 440 aa20.87■□□□□ 0.93
CLIP2-206ENST00000487091 MYBP10242 640 aa20.87■□□□□ 0.93
CLIP2-206ENST00000487091 RPL9P32969 192 aaKnown RBP20.87■□□□□ 0.93
CLIP2-206ENST00000487091 DDIT3P35638 169 aa20.87■□□□□ 0.93
CLIP2-206ENST00000487091 SOX4Q06945 474 aaPredicted RBP20.87■□□□□ 0.93
CLIP2-206ENST00000487091 DHX8Q14562 1220 aaKnown RBP20.87■□□□□ 0.93
CLIP2-206ENST00000487091 FBXL6Q8N531 539 aa20.87■□□□□ 0.93
CLIP2-206ENST00000487091 MYCT1Q8N699 235 aa20.87■□□□□ 0.93
CLIP2-206ENST00000487091 PARVGQ9HBI0 331 aa20.87■□□□□ 0.93
CLIP2-206ENST00000487091 ANKFY1Q9P2R3 1169 aa20.87■□□□□ 0.93
CLIP2-206ENST00000487091 FBXW11Q9UKB1 542 aa20.87■□□□□ 0.93
CLIP2-206ENST00000487091 SRPRBQ9Y5M8 271 aaKnown RBP20.87■□□□□ 0.93
CLIP2-206ENST00000487091 CLUHO75153 1309 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 K7ELQ4 463 aaPredicted RBP20.86■□□□□ 0.93
CLIP2-206ENST00000487091 FAM13AO94988 1023 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 ASGR2P07307 311 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 HARSP12081 509 aaKnown RBP20.86■□□□□ 0.93
CLIP2-206ENST00000487091 IGFBP6P24592 240 aaPredicted RBP20.86■□□□□ 0.93
CLIP2-206ENST00000487091 ABCD1P33897 745 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 RAB33AQ14088 237 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 SLC10A6Q3KNW5 377 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 SUGP1Q8IWZ8 645 aaKnown RBP20.86■□□□□ 0.93
CLIP2-206ENST00000487091 C3orf58Q8NDZ4 430 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 LARP4BQ92615 738 aaKnown RBP20.86■□□□□ 0.93
CLIP2-206ENST00000487091 PLEKHA5Q9HAU0 1116 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 PIDD1Q9HB75 910 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 MTRRQ9UBK8 725 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 FBXO2Q9UK22 296 aaPredicted RBP20.86■□□□□ 0.93
CLIP2-206ENST00000487091 BACE2Q9Y5Z0 518 aa20.86■□□□□ 0.93
CLIP2-206ENST00000487091 MORC2Q9Y6X9 1032 aaPredicted RBP20.86■□□□□ 0.93
CLIP2-206ENST00000487091 PODXLO00592 558 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 MEFVO15553 781 aaPredicted RBP20.85■□□□□ 0.93
CLIP2-206ENST00000487091 PIGRP01833 764 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 KRT18P05783 430 aaKnown RBP20.85■□□□□ 0.93
CLIP2-206ENST00000487091 MARCKSP29966 332 aaPredicted RBP20.85■□□□□ 0.93
CLIP2-206ENST00000487091 KYAT1Q16773 422 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 ANKS3Q6ZW76 656 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 BICD1Q96G01 975 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 EPSTI1Q96J88 318 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 CCDC39Q9UFE4 941 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 TBX20Q9UMR3 447 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 MTMR6Q9Y217 621 aa20.85■□□□□ 0.93
CLIP2-206ENST00000487091 ADAM12O43184 909 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 TRAK2O60296 914 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 CLTAP09496 248 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 HNRNPA1P09651 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
CLIP2-206ENST00000487091 HOXA9P31269 272 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 BRCC3P46736 316 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 LIG4P49917 911 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 LIN9Q5TKA1 542 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 FAM173BQ6P4H8 233 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 USP49Q70CQ1 688 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 RTL10Q7L3V2 364 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 HAPLN2Q9GZV7 340 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 ZSCAN16Q9H4T2 348 aaPredicted RBP20.84■□□□□ 0.93
CLIP2-206ENST00000487091 IGSF9Q9P2J2 1179 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 STK17AQ9UEE5 414 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.84■□□□□ 0.93
CLIP2-206ENST00000487091 DOCK8Q8NF50 2099 aa20.84■□□□□ 0.93
CLIP2-206ENST00000487091 PDCD11Q14690 1871 aaKnown RBP20.84■□□□□ 0.93
CLIP2-206ENST00000487091 K7ENM7 598 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 N4BP1O75113 896 aaKnown RBP20.83■□□□□ 0.93
CLIP2-206ENST00000487091 TBCAO75347 108 aaKnown RBP20.83■□□□□ 0.93
CLIP2-206ENST00000487091 TKTP29401 623 aaKnown RBP20.83■□□□□ 0.93
CLIP2-206ENST00000487091 OR1D2P34982 312 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 MATR3P43243 847 aaKnown RBP eCLIP20.83■□□□□ 0.93
CLIP2-206ENST00000487091 TDGQ13569 410 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 UVSSAQ2YD98 709 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 SEZ6Q53EL9 994 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 SPECC1Q5M775 1068 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 C18orf25Q96B23 403 aaPredicted RBP20.83■□□□□ 0.93
CLIP2-206ENST00000487091 FIZ1Q96SL8 496 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 PRRX2Q99811 253 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 KCNK12Q9HB15 430 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.83■□□□□ 0.93
CLIP2-206ENST00000487091 EPS15L1Q9UBC2 864 aa20.83■□□□□ 0.93
CLIP2-206ENST00000487091 DOCK6Q96HP0 2047 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms