RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 NDC1Q9BTX1 674 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 LSM14BQ9BX40 385 aaKnown RBP4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 PRDM12Q9H4Q4 367 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 C14orf93Q9H972 538 aaKnown RBP4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 GEMIN8Q9NWZ8 242 aaKnown RBP4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 ING3Q9NXR8 418 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 TRPM5Q9NZQ8 1165 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 DPP7Q9UHL4 492 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 PRSS50Q9UI38 385 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 PNMA8BQ9ULN7 279 aaPredicted RBP4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 PCDHB6Q9Y5E3 794 aa4.64□□□□□ -1.67
SNRNP27-204ENST00000487029 LEFTY2O00292 366 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 DAPK3O43293 454 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 NDUFA10O95299 355 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 U2AF1L5P0DN76 240 aaPredicted RBP4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 U2AF1Q01081 240 aaKnown RBP eCLIP4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 PPARAQ07869 468 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 VPS72Q15906 364 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 CCDC178Q5BJE1 867 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 CXorf57Q6NSI4 855 aaKnown RBP4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 BMP8AQ7Z5Y6 402 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 LCORLQ8N3X6 602 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 BOLLQ8N9W6 283 aaKnown RBP4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 TSPEARQ8WU66 669 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 HIST1H2AHQ96KK5 128 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 HIST1H2AJQ99878 128 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 NOL10Q9BSC4 688 aaKnown RBP4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 SOX7Q9BT81 388 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 IFT122Q9HBG6 1241 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 AKIP1Q9NQ31 210 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 NOB1Q9ULX3 412 aaKnown RBP4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 USP18Q9UMW8 372 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 CHST2Q9Y4C5 530 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 INSL6Q9Y581 213 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 CDY2AQ9Y6F7 541 aa4.63□□□□□ -1.67
SNRNP27-204ENST00000487029 MTSS1O43312 755 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 NRP2O60462 931 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 ZRANB2O95218 330 aaKnown RBP eCLIP4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 IL33O95760 270 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 ATF3P18847 181 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 C5AR1P21730 350 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 FOXF2Q12947 444 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 MLC1Q15049 377 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 ANO4Q32M45 955 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 BEAN1Q3B7T3 259 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 MAGEB6Q8N7X4 407 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 GAB3Q8WWW8 586 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 SYNPO2Q9UMS6 1093 aa4.62□□□□□ -1.67
SNRNP27-204ENST00000487029 GOLGA6CA6NDK9 693 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 GOLGA6BA6NDN3 693 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 MYADML2A6NDP7 307 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 UNC119BA6NIH7 251 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 KIF3BO15066 747 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 PRPF3O43395 683 aaKnown RBP4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 NDUFS2O75306 463 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 GOLGA6DP0CG33 693 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 XPAP23025 273 aaPredicted RBP4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 CYP2C19P33261 490 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 ADKP55263 362 aaKnown RBP4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 CDK17Q00537 523 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 GDF7Q7Z4P5 450 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 C14orf80Q86SX3 495 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 TPH2Q8IWU9 490 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 CAVIN3Q969G5 261 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 COQ10AQ96MF6 247 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 SLC2A13Q96QE2 648 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 PCGF6Q9BYE7 350 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 ACE2Q9BYF1 805 aaPredicted RBP4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 GOLGA6AQ9NYA3 693 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 RNF7Q9UBF6 113 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 EVLQ9UI08 416 aaPredicted RBP4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 TUBD1Q9UJT1 453 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 SALL3Q9BXA9 1300 aa4.61□□□□□ -1.67
SNRNP27-204ENST00000487029 RNASET2O00584 256 aaKnown RBP4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 PRC1O43663 620 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 SEC24DO94855 1032 aaPredicted RBP4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 AKAP5P24588 427 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 CXCR5P32302 372 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 CASRP41180 1078 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 NRG3P56975 720 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 GTF2H3Q13889 308 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 RRP12Q5JTH9 1297 aaKnown RBP4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 METTL24Q5JXM2 366 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 XYLT1Q86Y38 959 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 SYT12Q8IV01 421 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 GLB1L2Q8IW92 636 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 MIER2Q8N344 545 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 PIK3C3Q8NEB9 887 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 TTC8Q8TAM2 541 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 FATE1Q969F0 183 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 AIFM3Q96NN9 605 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 ADAM2Q99965 735 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 ZBTB21Q9ULJ3 1066 aa4.6□□□□□ -1.67
SNRNP27-204ENST00000487029 PIPSLA2A3N6 862 aa4.59□□□□□ -1.67
SNRNP27-204ENST00000487029 PROB1E7EW31 1015 aa4.59□□□□□ -1.67
SNRNP27-204ENST00000487029 GAAP10253 952 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms