RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 DUSP15Q9H1R2 295 aaPredicted RBP9.39□□□□□ -0.91
APTX-228ENST00000486724 RNF39Q9H2S5 420 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 HCFC1R1Q9NWW0 138 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 CEP131Q9UPN4 1083 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 SHROOM3Q8TF72 1996 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 ASXL3Q9C0F0 2248 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 PTPN13Q12923 2485 aa9.39□□□□□ -0.91
APTX-228ENST00000486724 CNTNAP2Q9UHC6 1331 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 EML5Q05BV3 1969 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 CAPN8A6NHC0 703 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 MEIS2O14770 477 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 MAGEB2O15479 319 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 ZBTB43O43298 467 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 ZNF623O75123 536 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 DDAH1O94760 285 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 PSMC3P17980 439 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 RPL17P18621 184 aaKnown RBP9.38□□□□□ -0.91
APTX-228ENST00000486724 OR1G1P47890 313 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 GPC3P51654 580 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 SRSF1Q07955 248 aaKnown RBP eCLIP9.38□□□□□ -0.91
APTX-228ENST00000486724 STK3Q13188 491 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 KARSQ15046 597 aaKnown RBP9.38□□□□□ -0.91
APTX-228ENST00000486724 USP41Q3LFD5 358 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 NECAB1Q8N987 351 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 SPRYD3Q8NCJ5 442 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 NLRP7Q8WX94 980 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 CRELD1Q96HD1 420 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 ZNF668Q96K58 619 aaPredicted RBP9.38□□□□□ -0.91
APTX-228ENST00000486724 B3GALT6Q96L58 329 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 LLPHQ9BRT6 129 aaKnown RBP9.38□□□□□ -0.91
APTX-228ENST00000486724 APOL6Q9BWW8 343 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 RIOX1Q9H6W3 641 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 SENP2Q9HC62 589 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 ZFP14Q9HCL3 533 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 KCNH7Q9NS40 1196 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 MAD2L2Q9UI95 211 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 PIN4Q9Y237 131 aaKnown RBP9.38□□□□□ -0.91
APTX-228ENST00000486724 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 MYO9AB2RTY4 2548 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 NOTCH4Q99466 2003 aa9.38□□□□□ -0.91
APTX-228ENST00000486724 ATMQ13315 3056 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 ASCC3Q8N3C0 2202 aaKnown RBP9.37□□□□□ -0.91
APTX-228ENST00000486724 CACNA1EQ15878 2313 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
APTX-228ENST00000486724 GOLGA8AA7E2F4 631 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 EXTL3O43909 919 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 POMCP01189 267 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 CALM1P0DP23 149 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 CALM2P0DP24 149 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 CALM3P0DP25 149 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 SFPQP23246 707 aaKnown RBP eCLIP9.37□□□□□ -0.91
APTX-228ENST00000486724 AFF1P51825 1210 aaKnown RBP9.37□□□□□ -0.91
APTX-228ENST00000486724 LMAN2Q12907 356 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 EFCAB12Q6NXP0 572 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 SYNE3Q6ZMZ3 975 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 AGMOQ6ZNB7 445 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 CATIPQ7Z7H3 387 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 PIP4P1Q86T03 277 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 MICU3Q86XE3 530 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 CCDC60Q8IWA6 550 aaPredicted RBP9.37□□□□□ -0.91
APTX-228ENST00000486724 CKAP2LQ8IYA6 745 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 ZNF654Q8IZM8 581 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 SYNPOQ8N3V7 929 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 LINC01465Q8N7H1 131 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 SLC7A14Q8TBB6 771 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 DEPDC1BQ8WUY9 529 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 RSAD1Q9HA92 442 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 ZNF302Q9NR11 478 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 DNMT3BQ9UBC3 853 aaKnown RBP9.37□□□□□ -0.91
APTX-228ENST00000486724 DKK4Q9UBT3 224 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 KIF3AQ9Y496 699 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 NUP205Q92621 2012 aa9.37□□□□□ -0.91
APTX-228ENST00000486724 ANKRD17O75179 2603 aaKnown RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 A0A087WV48 116 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 UPK3BL1B0FP48 263 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 UPK3BL2E5RIL1 263 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 CAPN9O14815 690 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 ZNF263O14978 683 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 ZNF862O60290 1169 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 NR1I2O75469 434 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 CSDE1O75534 798 aaKnown RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 CEBPBP17676 345 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 KIF5BP33176 963 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 KPNA1P52294 538 aaPredicted RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 CCT2P78371 535 aaKnown RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 NUCB2P80303 420 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 KCNC4Q03721 635 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 CCINQ13939 588 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 SLC5A9Q2M3M2 681 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 SLC35G1Q2M3R5 365 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 WDR44Q5JSH3 913 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 FAM78AQ5JUQ0 283 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 DNTTIP2Q5QJE6 756 aaKnown RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 FUT10Q6P4F1 479 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 VITQ6UXI7 678 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 ABHD15Q6UXT9 468 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 CCNI2Q6ZMN8 369 aaPredicted RBP9.36□□□□□ -0.91
APTX-228ENST00000486724 TEX2Q8IWB9 1127 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 COLGALT2Q8IYK4 626 aa9.36□□□□□ -0.91
APTX-228ENST00000486724 LRRC71Q8N4P6 559 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms