RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 GLYCTKQ8IVS8 523 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 PLCD3Q8N3E9 789 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 CLSTN3Q9BQT9 956 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 GOLGA2P5Q9HBQ8 144 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 CNTN3Q9P232 1028 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 TBX20Q9UMR3 447 aa20.13■□□□□ 0.81
PRPF40A-209ENST00000486100 TRAPPC3O43617 180 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 MYBP10242 640 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 FGFR3P22607 806 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 PSMD5Q16401 504 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 PTPN21Q16825 1174 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 SLC10A6Q3KNW5 377 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 RRAGBQ5VZM2 374 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 ZDHHC14Q8IZN3 488 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 BICD1Q96G01 975 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 ZHX3Q9H4I2 956 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 STK17AQ9UEE5 414 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 HCN4Q9Y3Q4 1203 aa20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 ARIH1Q9Y4X5 557 aaPredicted RBP20.12■□□□□ 0.81
PRPF40A-209ENST00000486100 K7ENM7 598 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 MEFVO15553 781 aaPredicted RBP20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 TBCAO75347 108 aaKnown RBP20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 PAPLNO95428 1278 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 PIGRP01833 764 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 RPL9P32969 192 aaKnown RBP20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 ABCD1P33897 745 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 TXLNAP40222 546 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 MATR3P43243 847 aaKnown RBP eCLIP20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 SEZ6Q53EL9 994 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 CCDC149Q6ZUS6 474 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 KRI1Q8N9T8 703 aaKnown RBP20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 TDRD5Q8NAT2 981 aaKnown RBP20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 KREMEN2Q8NCW0 462 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 ACSF2Q96CM8 615 aaPredicted RBP20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 FIZ1Q96SL8 496 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 HAPLN2Q9GZV7 340 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 PLEKHA5Q9HAU0 1116 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 ZDHHC7Q9NXF8 308 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 GTF3C3Q9Y5Q9 886 aa20.11■□□□□ 0.81
PRPF40A-209ENST00000486100 PODXLO00592 558 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 RFPL2O75678 378 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 CLTAP09496 248 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 NASPP49321 788 aaPredicted RBP20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 LIG4P49917 911 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 GTF2BQ00403 316 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 KYAT1Q16773 422 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 HFE2Q6ZVN8 426 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 OTOP3Q7RTS5 596 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 BMP8AQ7Z5Y6 402 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 HSCBQ8IWL3 235 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 C3orf58Q8NDZ4 430 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 LIMD1Q9UGP4 676 aa20.1■□□□□ 0.81
PRPF40A-209ENST00000486100 TMEM221A6NGB7 291 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 M0R296 226 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 HNRNPDLO14979 420 aaKnown RBP20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 PDIA4P13667 645 aaKnown RBP20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 NMT1P30419 496 aaKnown RBP20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 BRCC3P46736 316 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 SIGLEC14Q08ET2 396 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 CCDC73Q6ZRK6 1079 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 SV2BQ7L1I2 683 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 LINC00301Q8NCQ3 95 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 SMG7Q92540 1137 aaKnown RBP20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 C18orf25Q96B23 403 aaPredicted RBP20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 ZNF707Q96C28 371 aaPredicted RBP20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 MFSD14AQ96MC6 490 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 PRKD2Q9BZL6 878 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 ST6GALNAC4Q9H4F1 302 aa20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 WDR6Q9NNW5 1121 aaKnown RBP20.09■□□□□ 0.81
PRPF40A-209ENST00000486100 ADAM12O43184 909 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 ZMYND10O75800 440 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 TKTP29401 623 aaKnown RBP20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 RAB33AQ14088 237 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 ANKS3Q6ZW76 656 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 DYMQ7RTS9 669 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 DDX12PQ92771 950 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 ZNF396Q96N95 335 aaPredicted RBP20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 PANK2Q9BZ23 570 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 MTRRQ9UBK8 725 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 FBXW11Q9UKB1 542 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 SORCS3Q9UPU3 1222 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 BACE2Q9Y5Z0 518 aa20.08■□□□□ 0.81
PRPF40A-209ENST00000486100 A0A0B4J269 797 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 TTC26A0AVF1 554 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 MYMKA6NI61 221 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 I3L4J1 428 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 OGTO15294 1046 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 CXCL8P10145 99 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 OR1D2P34982 312 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 STK38Q15208 465 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 ZNF720Q7Z2F6 126 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 MAP4K3Q8IVH8 894 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 UBALD2Q8IYN6 164 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 STAMQ92783 540 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 PBXIP1Q96AQ6 731 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 PIDD1Q9HB75 910 aa20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 TFIP11Q9UBB9 837 aaKnown RBP20.07■□□□□ 0.8
PRPF40A-209ENST00000486100 SPTLC2O15270 562 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 FAM189A1O60320 539 aa20.06■□□□□ 0.8
PRPF40A-209ENST00000486100 HSP90AA1P07900 732 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms