RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 WDR33Q9C0J8 1336 aaKnown RBP6.24□□□□□ -1.41
SMARCC1-207ENST00000485833 WNT10BO00744 389 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 ABHD16AO95870 558 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 GSPT1P15170 499 aaKnown RBP6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 LAG3P18627 525 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 IARSP41252 1262 aaKnown RBP6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 FAM189BP81408 668 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 SEPT2Q15019 361 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 TIGD2Q4W5G0 525 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 RRP12Q5JTH9 1297 aaKnown RBP6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 LY6G5CQ5SRR4 150 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 AFMIDQ63HM1 303 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 PLXDC1Q8IUK5 500 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 CBARPQ8N350 705 aaPredicted RBP6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 PROKR1Q8TCW9 393 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 CHFRQ96EP1 664 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 SLC2A13Q96QE2 648 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 MLST8Q9BVC4 326 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 DNM3Q9UQ16 869 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 HS3ST4Q9Y661 456 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 UGGT2Q9NYU1 1516 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 FER1L4A9Z1Z3 1794 aa6.23□□□□□ -1.41
SMARCC1-207ENST00000485833 GAGE12BA1L429 117 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 GAGE12HA6NDE8 117 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 RNASET2O00584 256 aaKnown RBP6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 SPATA31D3P0C874 917 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 RAP2AP10114 183 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 SLC6A9P48067 706 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 CDKN1CP49918 316 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 CLUL1Q15846 466 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 FAM102AQ5T9C2 384 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 SYDE2Q5VT97 1194 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 KCNV1Q6PIU1 500 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 Q6ZPA2 131 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 SPATA31D4Q6ZUB0 917 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 MRGPRGQ86SM5 289 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 DRC7Q8IY82 874 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 CASKIN2Q8WXE0 1202 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 MYEOVQ96EZ4 313 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 MRI1Q9BV20 369 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 LDAHQ9H6V9 325 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 AKIP1Q9NQ31 210 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 TMEM140Q9NV12 185 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 AJAP1Q9UKB5 411 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 SIK3Q9Y2K2 1263 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 PREX1Q8TCU6 1659 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 TTC37Q6PGP7 1564 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 ARID4BQ4LE39 1312 aaPredicted RBP6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 RICTORQ6R327 1708 aa6.22□□□□□ -1.41
SMARCC1-207ENST00000485833 ABCA9Q8IUA7 1624 aa6.21□□□□□ -1.41
SMARCC1-207ENST00000485833 CARMIL1Q5VZK9 1371 aa6.21□□□□□ -1.41
SMARCC1-207ENST00000485833 DRGXA6NNA5 263 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 ZNF185O15231 689 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 NCR1O76036 304 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 MT-CO1P00395 513 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 KRT4P19013 534 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 CDK11BP21127 795 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 ALDH1A3P47895 512 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 GUCY2FP51841 1108 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 CHN2P52757 468 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 RAP2BP61225 183 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 AMPD3Q01432 767 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 PDCD4Q53EL6 469 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 METRNLQ641Q3 311 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 PGM2L1Q6PCE3 622 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 RPUSD2Q8IZ73 545 aaKnown RBP6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 C1orf162Q8NEQ5 155 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 OR2I1PQ8NGU4 316 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 CYFIP2Q96F07 1278 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 IKZF4Q9H2S9 585 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 SLITRK6Q9H5Y7 841 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 MKS1Q9NXB0 559 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 TRHDEQ9UKU6 1024 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 MED1Q15648 1581 aaPredicted RBP6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 PNPLA7Q6ZV29 1317 aa6.21□□□□□ -1.42
SMARCC1-207ENST00000485833 YEATS2Q9ULM3 1422 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 A0A087X1B8 175 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 CENPVL1A0A0U1RR11 272 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 TMEM191CA6NGB0 347 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 TMEM200CA6NKL6 621 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 TEX33O43247 280 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 GPR32O75388 356 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 ATP5JP18859 108 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 FPR1P21462 350 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 PURAQ00577 322 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 MTMR1Q13613 665 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 PTPAQ15257 358 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 BEAN1Q3B7T3 259 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 OTUD7BQ6GQQ9 843 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 CEP89Q96ST8 783 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 NEU1Q99519 415 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 TEX101Q9BY14 249 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 MANSC1Q9H8J5 431 aa6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 USP15Q9Y4E8 981 aaPredicted RBP6.2□□□□□ -1.42
SMARCC1-207ENST00000485833 KIF27Q86VH2 1401 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 SUV39H1O43463 412 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 PCSK1P29120 753 aa6.19□□□□□ -1.42
SMARCC1-207ENST00000485833 WASP42768 502 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms