RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ADH1AP07327 375 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 CNPP09543 421 aaKnown RBP13.63□□□□□ -0.23
PTCD1-205ENST00000485746 MYBP10242 640 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 KCNE1P15382 129 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 CMA1P23946 247 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 DSG1Q02413 1049 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 CREMQ03060 361 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 SPAG1Q07617 926 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 XKR4Q5GH76 650 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 CES5AQ6NT32 575 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 TMEM184AQ6ZMB5 413 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 GLYCTKQ8IVS8 523 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 KCNN1Q92952 543 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 C18orf25Q96B23 403 aaPredicted RBP13.63□□□□□ -0.23
PTCD1-205ENST00000485746 ZMAT2Q96NC0 199 aaKnown RBP13.63□□□□□ -0.23
PTCD1-205ENST00000485746 C7orf25Q9BPX7 421 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 TTPALQ9BTX7 342 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 TRIM9Q9C026 710 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 HAPLN2Q9GZV7 340 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 BLZF1Q9H2G9 400 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 OLFML3Q9NRN5 406 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.63□□□□□ -0.23
PTCD1-205ENST00000485746 DZANK1Q9NVP4 752 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 SERTAD1Q9UHV2 236 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 AGO2Q9UKV8 859 aaKnown RBP13.63□□□□□ -0.23
PTCD1-205ENST00000485746 NUB1Q9Y5A7 615 aa13.63□□□□□ -0.23
PTCD1-205ENST00000485746 TRANK1O15050 2925 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 PLXNA4Q9HCM2 1894 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 FRMD3A2A2Y4 597 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 PRPF6O94906 941 aaKnown RBP13.62□□□□□ -0.23
PTCD1-205ENST00000485746 PFKFB1P16118 471 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 EPCAMP16422 314 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 RPL9P32969 192 aaKnown RBP13.62□□□□□ -0.23
PTCD1-205ENST00000485746 TNFSF9P41273 254 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 ACOT2P49753 483 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 NAB2Q15742 525 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 SMAD2Q15796 467 aaKnown RBP13.62□□□□□ -0.23
PTCD1-205ENST00000485746 UPP1Q16831 310 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 RARS2Q5T160 578 aaKnown RBP13.62□□□□□ -0.23
PTCD1-205ENST00000485746 KIAA0319Q5VV43 1072 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 SLC39A4Q6P5W5 647 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 PDXDC1Q6P996 788 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 PALB2Q86YC2 1186 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 CD302Q8IX05 232 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 FSIP1Q8NA03 581 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 SMRP1Q8NCR6 262 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 BEST2Q8NFU1 509 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 POP1Q99575 1024 aaKnown RBP13.62□□□□□ -0.23
PTCD1-205ENST00000485746 TMEM206Q9H813 350 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 CHST7Q9NS84 486 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 DPP7Q9UHL4 492 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 USP25Q9UHP3 1055 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 USP15Q9Y4E8 981 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-205ENST00000485746 EYSQ5T1H1 3165 aa13.62□□□□□ -0.23
PTCD1-205ENST00000485746 TISP43B9A030 160 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 TEX28O15482 410 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 LILRB3O75022 631 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 GLUD1P00367 558 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 SLFN14P0C7P3 912 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 CASP1P29466 404 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 SYKP43405 635 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 SOX4Q06945 474 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-205ENST00000485746 KCNA1Q09470 495 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 ENOX2Q16206 610 aaKnown RBP13.61□□□□□ -0.23
PTCD1-205ENST00000485746 FAM26FQ5R3K3 315 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 ZBTB41Q5SVQ8 909 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 PRSS55Q6UWB4 352 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-205ENST00000485746 UNC13DQ70J99 1090 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 C12orf76Q8N812 135 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-205ENST00000485746 SLC22A17Q8WUG5 538 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 FBXL18Q96ME1 805 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 GDPD2Q9HCC8 539 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 PRKAG3Q9UGI9 489 aa13.61□□□□□ -0.23
PTCD1-205ENST00000485746 UBQLN1Q9UMX0 589 aaKnown RBP13.61□□□□□ -0.23
PTCD1-205ENST00000485746 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-205ENST00000485746 TTC26A0AVF1 554 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 TMEM189-UBE2V1I3L0A0 370 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 I3L4J1 428 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 PPP1R37O75864 691 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 LDHAP00338 332 aaKnown RBP13.6□□□□□ -0.23
PTCD1-205ENST00000485746 RPL17P18621 184 aaKnown RBP13.6□□□□□ -0.23
PTCD1-205ENST00000485746 MCM4P33991 863 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 BRCC3P46736 316 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 CLCN4P51793 760 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 CASP5P51878 434 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 ITIH3Q06033 890 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 CUL4BQ13620 913 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 KCNC3Q14003 757 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 TMEM132DQ14C87 1099 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 PSMD5Q16401 504 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 JADE1Q6IE81 842 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 ARMCX5Q6P1M9 558 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 SYCE2Q6PIF2 218 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.6□□□□□ -0.23
PTCD1-205ENST00000485746 ADHFE1Q8IWW8 467 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 GPR65Q8IYL9 337 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 GRAMD1CQ8IYS0 662 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 RNF168Q8IYW5 571 aaPredicted RBP13.6□□□□□ -0.23
PTCD1-205ENST00000485746 GJD3Q8N144 294 aa13.6□□□□□ -0.23
PTCD1-205ENST00000485746 HPS3Q969F9 1004 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms