RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 HNRNPDQ14103 355 aaKnown RBP11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 C4orf17Q53FE4 359 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 HIST2H2BCQ6DN03 193 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 SWSAP1Q6NVH7 229 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 SLC23A3Q6PIS1 610 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 MFSD6Q6ZSS7 791 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 NAXDQ8IW45 347 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 GPR65Q8IYL9 337 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 CUL5Q93034 780 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 ZFP42Q96MM3 310 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 GAD1Q99259 594 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 FDXACB1Q9BRP7 624 aaPredicted RBP11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 COLEC11Q9BWP8 271 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 AVENQ9NQS1 362 aaPredicted RBP11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 CNTNAP2Q9UHC6 1331 aa11.27□□□□□ -0.61
EXOSC1-210ENST00000485122 NOTCH2Q04721 2471 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 ATG13O75143 517 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 PTPN2P17706 415 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 SFPQP23246 707 aaKnown RBP eCLIP11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 OR1D2P34982 312 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 UBE2SQ16763 222 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 UBXN11Q5T124 520 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 MRPL10Q7Z7H8 261 aaKnown RBP11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 SYT12Q8IV01 421 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 HS6ST3Q8IZP7 471 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 FRMD1Q8N878 549 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 ESR2Q92731 530 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 LRRC3BQ96PB8 259 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 TMEM209Q96SK2 561 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 PAAF1Q9BRP4 392 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 GCOM2Q9BZD3 368 aaPredicted RBP11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 RIOX1Q9H6W3 641 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 MGAQ8IWI9 3026 aa11.26□□□□□ -0.61
EXOSC1-210ENST00000485122 PNMA6FA0A0J9YX94 578 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 MAGEB2O15479 319 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 TMOD1P28289 359 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 IL12RB1P42701 662 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 FCHO2Q0JRZ9 810 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 DMC1Q14565 340 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 ALX1Q15699 326 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 NAIF1Q69YI7 327 aaPredicted RBP11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 PDZD4Q76G19 769 aaPredicted RBP11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 CATSPER4Q7RTX7 472 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 FTSJ3Q8IY81 847 aaKnown RBP11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 SPRYD3Q8NCJ5 442 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 RPLP0P6Q8NHW5 317 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 RLN3Q8WXF3 142 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 CHFRQ96EP1 664 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 ZSCAN10Q96SZ4 725 aaPredicted RBP11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 LY9Q9HBG7 655 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 TOR4AQ9NXH8 423 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 EBF1Q9UH73 591 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 RELNP78509 3460 aa11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 NUP210Q8TEM1 1887 aaPredicted RBP11.25□□□□□ -0.61
EXOSC1-210ENST00000485122 PALM3A6NDB9 673 aaPredicted RBP11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 ARL5CA6NH57 179 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 GOLGA8CPA6NN73 597 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 PIK3CDO00329 1044 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 PLK4O00444 970 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 POU3F2P20265 443 aaPredicted RBP11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 ITPKAP23677 461 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 ADSSP30520 456 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 KIF5BP33176 963 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 TEAD2Q15562 447 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 USP39Q53GS9 565 aaKnown RBP11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 TMEM196Q5HYL7 178 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 FAM171A1Q5VUB5 890 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 ANO7Q6IWH7 933 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 IQCA1Q86XH1 822 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 ZNF710Q8N1W2 664 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 SMG8Q8ND04 991 aaKnown RBP11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 MXRA8Q9BRK3 442 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 TTPALQ9BTX7 342 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 TRPV4Q9HBA0 871 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 AGO4Q9HCK5 861 aaKnown RBP11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 HSPBP1Q9NZL4 362 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 HES2Q9Y543 173 aa11.24□□□□□ -0.61
EXOSC1-210ENST00000485122 ARID2Q68CP9 1835 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 CCER2I3L3R5 266 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 TNFRSF10BO14763 440 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 MAFGO15525 162 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 CBFA2T3O75081 653 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 GJB3O75712 270 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 LRG1P02750 347 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 ATXN1LP0C7T5 689 aaKnown RBP11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 U2AF2P26368 475 aaKnown RBP eCLIP11.23□□□□□ -0.614e-7■■■□□ 15.2
EXOSC1-210ENST00000485122 SEMG2Q02383 582 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 GFPT1Q06210 699 aaPredicted RBP11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 RAB33AQ14088 237 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 C11orf74Q86VG3 221 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 PDCD7Q8N8D1 485 aaKnown RBP11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 TSTD1Q8NFU3 115 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 FNBP1Q96RU3 617 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 SLITRK6Q9H5Y7 841 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 CAPN10Q9HC96 672 aa11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 FBRSL1Q9HCM7 1045 aaKnown RBP11.23□□□□□ -0.61
EXOSC1-210ENST00000485122 AGPAT5Q9NUQ2 364 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms