RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 A0A1W2PQD8 194 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 ACTN4O43707 911 aaKnown RBP20.85■□□□□ 0.93
SNX17-206ENST00000484886 CLASP2O75122 1294 aaKnown RBP20.85■□□□□ 0.93
SNX17-206ENST00000484886 KCNE1P15382 129 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 NDUFA8P51970 172 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 CUL4BQ13620 913 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 USP41Q3LFD5 358 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 XKR4Q5GH76 650 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 FAM26FQ5R3K3 315 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 ZBTB41Q5SVQ8 909 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 CNNM4Q6P4Q7 775 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 UNC13DQ70J99 1090 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 PAGE5Q96GU1 130 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 STRA6Q9BX79 667 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 GPR62Q9BZJ7 368 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 CD207Q9UJ71 328 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 AGO2Q9UKV8 859 aaKnown RBP20.85■□□□□ 0.93
SNX17-206ENST00000484886 FAM50BQ9Y247 325 aa20.85■□□□□ 0.93
SNX17-206ENST00000484886 B3GAT3O94766 335 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 GLP2RO95838 553 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 BMP1P13497 986 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 KLRC2P26717 231 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 ACOT2P49753 483 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 CLCNKBP51801 687 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 SOX4Q06945 474 aaPredicted RBP20.84■□□□□ 0.93
SNX17-206ENST00000484886 SPAG1Q07617 926 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 POSTNQ15063 836 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 PUS10Q3MIT2 529 aaKnown RBP20.84■□□□□ 0.93
SNX17-206ENST00000484886 CEP57Q86XR8 500 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 VN1R2Q8NFZ6 395 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.84■□□□□ 0.93
SNX17-206ENST00000484886 NOC3LQ8WTT2 800 aaKnown RBP20.84■□□□□ 0.93
SNX17-206ENST00000484886 C18orf25Q96B23 403 aaPredicted RBP20.84■□□□□ 0.93
SNX17-206ENST00000484886 KIF12Q96FN5 646 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 COL25A1Q9BXS0 654 aaPredicted RBP20.84■□□□□ 0.93
SNX17-206ENST00000484886 TMEM206Q9H813 350 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 PLEKHA5Q9HAU0 1116 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 HPSEQ9Y251 543 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 IRAK3Q9Y616 596 aa20.84■□□□□ 0.93
SNX17-206ENST00000484886 SPDYE4A6NLX3 237 aa20.83■□□□□ 0.93
SNX17-206ENST00000484886 LACTBL1A8MY62 500 aa20.83■□□□□ 0.93
SNX17-206ENST00000484886 DLL1O00548 723 aa20.83■□□□□ 0.93
SNX17-206ENST00000484886 MEFVO15553 781 aaPredicted RBP20.83■□□□□ 0.93
SNX17-206ENST00000484886 ELAVL2Q12926 359 aaKnown RBP20.83■□□□□ 0.93
SNX17-206ENST00000484886 ENOX2Q16206 610 aaKnown RBP20.83■□□□□ 0.93
SNX17-206ENST00000484886 FAM171A1Q5VUB5 890 aa20.83■□□□□ 0.93
SNX17-206ENST00000484886 DCLRE1AQ6PJP8 1040 aa20.83■□□□□ 0.93
SNX17-206ENST00000484886 RIN2Q8WYP3 895 aaPredicted RBP20.83■□□□□ 0.93
SNX17-206ENST00000484886 CASP10Q92851 521 aa20.83■□□□□ 0.93
SNX17-206ENST00000484886 DDX27Q96GQ7 796 aaKnown RBP20.83■□□□□ 0.93
SNX17-206ENST00000484886 CLEC1BQ9P126 229 aa20.83■□□□□ 0.93
SNX17-206ENST00000484886 HCFC2Q9Y5Z7 792 aa20.83■□□□□ 0.93
SNX17-206ENST00000484886 PVALEFA0A1B0GWK0 134 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 TTC26A0AVF1 554 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 PODXLO00592 558 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 FAM189A1O60320 539 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 CNPP09543 421 aaKnown RBP20.82■□□□□ 0.92
SNX17-206ENST00000484886 DSG1Q02413 1049 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 UPP1Q16831 310 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 PPFIBP1Q86W92 1011 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 RNF168Q8IYW5 571 aaPredicted RBP20.82■□□□□ 0.92
SNX17-206ENST00000484886 GLIS3Q8NEA6 775 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 KLHL5Q96PQ7 755 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 UHRF1Q96T88 793 aaPredicted RBP20.82■□□□□ 0.92
SNX17-206ENST00000484886 GOLPH3LQ9H4A5 285 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 EXOC1Q9NV70 894 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 TUBGCP4Q9UGJ1 667 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 CPSF3Q9UKF6 684 aaKnown RBP20.82■□□□□ 0.92
SNX17-206ENST00000484886 CIZ1Q9ULV3 898 aaPredicted RBP20.82■□□□□ 0.92
SNX17-206ENST00000484886 STYXL1Q9Y6J8 313 aa20.82■□□□□ 0.92
SNX17-206ENST00000484886 PDCD11Q14690 1871 aaKnown RBP20.81■□□□□ 0.92
SNX17-206ENST00000484886 XPOTO43592 962 aaKnown RBP20.81■□□□□ 0.92
SNX17-206ENST00000484886 IL9P15248 144 aa20.81■□□□□ 0.92
SNX17-206ENST00000484886 SMAD4Q13485 552 aaKnown RBP20.81■□□□□ 0.92
SNX17-206ENST00000484886 KIAA0319Q5VV43 1072 aa20.81■□□□□ 0.92
SNX17-206ENST00000484886 ARMCX5Q6P1M9 558 aa20.81■□□□□ 0.92
SNX17-206ENST00000484886 SAAL1Q96ER3 474 aa20.81■□□□□ 0.92
SNX17-206ENST00000484886 TTPALQ9BTX7 342 aa20.81■□□□□ 0.92
SNX17-206ENST00000484886 APOL5Q9BWW9 433 aa20.81■□□□□ 0.92
SNX17-206ENST00000484886 SLC39A2Q9NP94 309 aa20.81■□□□□ 0.92
SNX17-206ENST00000484886 UBQLN1Q9UMX0 589 aaKnown RBP20.81■□□□□ 0.92
SNX17-206ENST00000484886 NUB1Q9Y5A7 615 aa20.81■□□□□ 0.92
SNX17-206ENST00000484886 GRXCR2A6NFK2 248 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 TMEM189-UBE2V1I3L0A0 370 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 EIF3DO15371 548 aaKnown RBP eCLIP20.8■□□□□ 0.925e-6■□□□□ 8.9
SNX17-206ENST00000484886 TRAPPC3O43617 180 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 EFEMP2O95967 443 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 ADH1AP07327 375 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 EPCAMP16422 314 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 ADSSP30520 456 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 RPL9P32969 192 aaKnown RBP20.8■□□□□ 0.92
SNX17-206ENST00000484886 CREMQ03060 361 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 ANKRD54Q6NXT1 300 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 PRSS55Q6UWB4 352 aaPredicted RBP20.8■□□□□ 0.92
SNX17-206ENST00000484886 GLYCTKQ8IVS8 523 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 CD302Q8IX05 232 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 NELFCDQ8IXH7 590 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 CCDC34Q96HJ3 373 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 MSLNLQ96KJ4 702 aa20.8■□□□□ 0.92
SNX17-206ENST00000484886 NECAB3Q96P71 396 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms