RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 GCAP28676 217 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 SETDB1Q15047 1291 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 DAB2IPQ5VWQ8 1189 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 ZNF449Q6P9G9 518 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 STXBP4Q6ZWJ1 553 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 RPGRQ92834 1020 aaKnown RBP21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 TMEM117Q9H0C3 514 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 LRRC4BQ9NT99 713 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 UVRAGQ9P2Y5 699 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 ACTL7BQ9Y614 415 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 NRAPQ86VF7 1730 aa21.04■□□□□ 0.96
RPUSD3-216ENST00000484134 H0Y3Z8 333 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 PDHA1P08559 390 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 PPM1KQ8N3J5 372 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 TEX9Q8N6V9 391 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 SEMA4DQ92854 862 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 HEMGNQ9BXL5 484 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 USH1CQ9Y6N9 552 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 ZNF831Q5JPB2 1677 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 SPDYE5A6NIY4 337 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 TULP1O00294 542 aaPredicted RBP21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 ENTPD5O75356 428 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 CYP4F22Q6NT55 531 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 ANKRD35Q8N283 1001 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 KCTD17Q8N5Z5 321 aa21.03■□□□□ 0.96
RPUSD3-216ENST00000484134 C6orf229H3BNL8 230 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 GRIN3BO60391 1043 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 ATP5HO75947 161 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 POTEJP0CG39 1038 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 CYP11B1P15538 503 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 ATP6V1C1P21283 382 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 CALRP27797 417 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 UBXN2AP68543 259 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 CETN1Q12798 172 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 PHLDB2Q86SQ0 1253 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 TRABD2AQ86V40 505 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 ENDOVQ8N8Q3 282 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 ASAP3Q8TDY4 903 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 SYT15Q9BQS2 421 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 DENND2DQ9H6A0 471 aaPredicted RBP21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 NUMBLQ9Y6R0 609 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 F5H6K3 240 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 MAPK13O15264 365 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 GAS8O95995 478 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 PTDSS1P48651 473 aaKnown RBP21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 CAV1Q03135 178 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 PPP2R5CQ13362 524 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 STAT4Q14765 748 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 SYDE1Q6ZW31 735 aaPredicted RBP21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 ATL2Q8NHH9 583 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 SHC3Q92529 594 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 INPP5DQ92835 1189 aa21.02■□□□□ 0.96
RPUSD3-216ENST00000484134 K7ENM7 598 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 RIMBP2O15034 1052 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 MYBL1P10243 752 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 FGFR1P11362 822 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 PCK1P35558 622 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 SARNPP82979 210 aaKnown RBP21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 IKQ13123 557 aaPredicted RBP21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 LLGL2Q6P1M3 1020 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 DDX1Q92499 740 aaKnown RBP21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 VTI1AQ96AJ9 217 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 NACC1Q96RE7 527 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 SH3GL3Q99963 347 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 NYAP2Q9P242 653 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 ANAPC7Q9UJX3 599 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 A0A1W2PRG0 241 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 E7ENQ6 273 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 P4HA2O15460 535 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 HLA-DOAP06340 250 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 BIRC2Q13490 618 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 PRR5LQ6MZQ0 368 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 C10orf82Q8WW14 230 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 CCDC17Q96LX7 622 aa21.01■□□□□ 0.95
RPUSD3-216ENST00000484134 PRELPP51888 382 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 CACNB3P54284 484 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 CDR2Q01850 454 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 MYBPC2Q14324 1141 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 IZUMO3Q5VZ72 239 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 DHX38Q92620 1227 aaKnown RBP21■□□□□ 0.95
RPUSD3-216ENST00000484134 ADAMTSL1Q8N6G6 1762 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 EDF1O60869 148 aaKnown RBP21■□□□□ 0.95
RPUSD3-216ENST00000484134 BMP3P12645 472 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 MAPK4P31152 587 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 MAGEA4P43358 317 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 MXI1P50539 228 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 PKN2Q16513 984 aaKnown RBP21■□□□□ 0.95
RPUSD3-216ENST00000484134 ACAD10Q6JQN1 1059 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21■□□□□ 0.95
RPUSD3-216ENST00000484134 DDX27Q96GQ7 796 aaKnown RBP21■□□□□ 0.95
RPUSD3-216ENST00000484134 CCDC77Q9BR77 488 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 PLVAPQ9BX97 442 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 UNC45AQ9H3U1 944 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 KIAA1586Q9HCI6 787 aa21■□□□□ 0.95
RPUSD3-216ENST00000484134 GOLGA8IPA6NC78 632 aa20.99■□□□□ 0.95
RPUSD3-216ENST00000484134 GOLGA8JA6NMD2 632 aa20.99■□□□□ 0.95
RPUSD3-216ENST00000484134 NDUFB10O96000 172 aa20.99■□□□□ 0.95
RPUSD3-216ENST00000484134 ADRB2P07550 413 aa20.99■□□□□ 0.95
RPUSD3-216ENST00000484134 RALAP11233 206 aa20.99■□□□□ 0.95
RPUSD3-216ENST00000484134 RPA3P35244 121 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms