RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TBC1D7Q9P0N9 293 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 ODF2LQ9ULJ1 636 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 HES2Q9Y543 173 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 NPHP3-ACAD11A0A0J9YXS1 232 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 LRRIQ4A6NIV6 560 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 NT5C1B-RDH14C9J2C7 533 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 EIF3DO15371 548 aaKnown RBP eCLIP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 LYPLA2O95372 231 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 GCNT3O95395 438 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 TNNT1P13805 278 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 RPL13P26373 211 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 PBX1P40424 430 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 RFC5P40937 340 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 KCNQ1P51787 676 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 ADKP55263 362 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 GPM6BQ13491 265 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 KNOP1Q1ED39 458 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 EDRF1Q3B7T1 1238 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 VWA3BQ502W6 1294 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 SPOUT1Q5T280 376 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 TWF2Q6IBS0 349 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 SLC24A5Q71RS6 500 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 OTUD6AQ7L8S5 288 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 SFR1Q86XK3 245 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 ECHDC2Q86YB7 292 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 IRF2BP1Q8IU81 584 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 NELFCDQ8IXH7 590 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 FAM178BQ8IXR5 827 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 CCAR2Q8N163 923 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 MYCT1Q8N699 235 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 TC2NQ8N9U0 490 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 CPLX3Q8WVH0 158 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 PRIMPOLQ96LW4 560 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 NECAB3Q96P71 396 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 RUSC1Q9BVN2 902 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 APOL6Q9BWW8 343 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 CXCL16Q9H2A7 254 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 OLFML3Q9NRN5 406 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 TYW1Q9NV66 732 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 ZNHIT6Q9NWK9 470 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 LARSQ9P2J5 1176 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 CACNG4Q9UBN1 327 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 DBR1Q9UK59 544 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 INPP5FQ9Y2H2 1132 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 R3HCC1Q9Y3T6 440 aaKnown RBP7.55□□□□□ -1.2
BRCA1-216ENST00000484087 PCDHB7Q9Y5E2 793 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
BRCA1-216ENST00000484087 UBE4BO95155 1302 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 INO80B-WBP1J3KQ70 363 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 PDXKO00764 312 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 TSPAN1O60635 241 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 MFAP3LO75121 409 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 DGAT1O75907 488 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 RPLP2P05387 115 aaKnown RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 ITGB1P05556 798 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 ZSCAN20P17040 1043 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 TRIM21P19474 475 aaKnown RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 GUCY2CP25092 1073 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 HOXA11P31270 313 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 CASP14P31944 242 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 ARL2P36404 184 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 RBM10P98175 930 aaKnown RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 MBTD1Q05BQ5 628 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 PPP2R3AQ06190 1150 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 ALCAMQ13740 583 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 CAMK1Q14012 370 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 PTPN21Q16825 1174 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 BMT2Q1RMZ1 405 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 UBXN11Q5T124 520 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 PADI6Q6TGC4 694 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 C1orf186Q6ZWK4 172 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 ADGRD2Q7Z7M1 963 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 ZNF410Q86VK4 478 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 TMEM173Q86WV6 379 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 TMTC1Q8IUR5 882 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 KLHL23Q8NBE8 558 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 GOLGA5Q8TBA6 731 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 SCFD1Q8WVM8 642 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 C16orf45Q96MC5 204 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 CASD1Q96PB1 797 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 INO80BQ9C086 356 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 GBP3Q9H0R5 595 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 NDST4Q9H3R1 872 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 CWH43Q9H720 699 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 ANKEF1Q9NU02 776 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 AGPAT5Q9NUQ2 364 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 LUC7L2Q9Y383 392 aaKnown RBP7.54□□□□□ -1.2
BRCA1-216ENST00000484087 PAXBP1Q9Y5B6 917 aa7.54□□□□□ -1.2
BRCA1-216ENST00000484087 SFI1A8K8P3 1242 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 F8W810 466 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 H3BNC9 293 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 LINC01565O15544 149 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 GYPCP04921 128 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 STAG3L1P0CL83 205 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 ARF4P18085 180 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-216ENST00000484087 KRT9P35527 623 aa7.53□□□□□ -1.2
BRCA1-216ENST00000484087 BMPR1AP36894 532 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms