RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 LONP1P36776 959 aaKnown RBP21.74■■□□□ 1.07
HPS4-213ENST00000483631 UBA7P41226 1012 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 PTPN5P54829 565 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 TDGQ13569 410 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 GLRA4Q5JXX5 417 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 SNX27Q96L92 541 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 TCHPQ9BT92 498 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.74■■□□□ 1.07
HPS4-213ENST00000483631 CNTN3Q9P232 1028 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 MTRRQ9UBK8 725 aa21.74■■□□□ 1.07
HPS4-213ENST00000483631 RPL9P32969 192 aaKnown RBP21.73■■□□□ 1.07
HPS4-213ENST00000483631 CLCNKBP51801 687 aa21.73■■□□□ 1.07
HPS4-213ENST00000483631 RAB33AQ14088 237 aa21.73■■□□□ 1.07
HPS4-213ENST00000483631 UVSSAQ2YD98 709 aa21.73■■□□□ 1.07
HPS4-213ENST00000483631 CEP57Q86XR8 500 aa21.73■■□□□ 1.07
HPS4-213ENST00000483631 IRF2BPLQ9H1B7 796 aa21.73■■□□□ 1.07
HPS4-213ENST00000483631 KCNK12Q9HB15 430 aa21.73■■□□□ 1.07
HPS4-213ENST00000483631 PIDD1Q9HB75 910 aa21.73■■□□□ 1.07
HPS4-213ENST00000483631 BACE2Q9Y5Z0 518 aa21.73■■□□□ 1.07
HPS4-213ENST00000483631 ZFP37Q9Y6Q3 630 aaPredicted RBP21.73■■□□□ 1.07
HPS4-213ENST00000483631 SFI1A8K8P3 1242 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 SPATA31D3P0C874 917 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 ABCD1P33897 745 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 NCKAP1LP55160 1127 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 NOLC1Q14978 699 aaKnown RBP eCLIP21.72■■□□□ 1.07
HPS4-213ENST00000483631 LIN9Q5TKA1 542 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 CD300LGQ6UXG3 332 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 SPATA31D4Q6ZUB0 917 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 ANKS3Q6ZW76 656 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 GLYCTKQ8IVS8 523 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 DUSP12Q9UNI6 340 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 DOCK6Q96HP0 2047 aa21.72■■□□□ 1.07
HPS4-213ENST00000483631 N4BP1O75113 896 aaKnown RBP21.71■■□□□ 1.07
HPS4-213ENST00000483631 GBP2P32456 591 aaPredicted RBP21.71■■□□□ 1.07
HPS4-213ENST00000483631 MCL1Q07820 350 aa21.71■■□□□ 1.07
HPS4-213ENST00000483631 RAD51AP2Q09MP3 1159 aa21.71■■□□□ 1.07
HPS4-213ENST00000483631 ARSHQ5FYA8 562 aa21.71■■□□□ 1.07
HPS4-213ENST00000483631 IER5LQ5T953 404 aa21.71■■□□□ 1.07
HPS4-213ENST00000483631 PRSS33Q8NF86 280 aa21.71■■□□□ 1.07
HPS4-213ENST00000483631 PLIN2Q99541 437 aa21.71■■□□□ 1.07
HPS4-213ENST00000483631 SYN3O14994 580 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 CLDN3O15551 220 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 ZNF131P52739 623 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 VCPP55072 806 aaKnown RBP21.7■■□□□ 1.06
HPS4-213ENST00000483631 OSTNP61366 133 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 SOX4Q06945 474 aaPredicted RBP21.7■■□□□ 1.06
HPS4-213ENST00000483631 KYAT1Q16773 422 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 ZMAT2Q96NC0 199 aaKnown RBP21.7■■□□□ 1.06
HPS4-213ENST00000483631 CCSER1Q9C0I3 900 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 PLEKHA5Q9HAU0 1116 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 GOLGA2P5Q9HBQ8 144 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 WDFY4Q6ZS81 3184 aa21.7■■□□□ 1.06
HPS4-213ENST00000483631 PODXLO00592 558 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 XYLBO75191 536 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 C8AP07357 584 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 SF3A1Q15459 793 aaKnown RBP21.69■■□□□ 1.06
HPS4-213ENST00000483631 PPM1LQ5SGD2 360 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 HAUS6Q7Z4H7 955 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 C3orf58Q8NDZ4 430 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 ZBTB45Q96K62 511 aaPredicted RBP21.69■■□□□ 1.06
HPS4-213ENST00000483631 MYADMQ96S97 322 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 TSPAN18Q96SJ8 248 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 REEP2Q9BRK0 252 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 BLOC1S4Q9NUP1 217 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 ANKFY1Q9P2R3 1169 aa21.69■■□□□ 1.06
HPS4-213ENST00000483631 PDGFBP01127 241 aaPredicted RBP21.68■■□□□ 1.06
HPS4-213ENST00000483631 PIGRP01833 764 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 LAMP2P13473 410 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 OR1D2P34982 312 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 CLCN5P51795 746 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 TCF15Q12870 199 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 SLC10A6Q3KNW5 377 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 SLC8B1Q6J4K2 584 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 GPBP1Q86WP2 473 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 RAD54LQ92698 747 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 INTS4Q96HW7 963 aaKnown RBP21.68■■□□□ 1.06
HPS4-213ENST00000483631 SMOC2Q9H3U7 446 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 PARVGQ9HBI0 331 aa21.68■■□□□ 1.06
HPS4-213ENST00000483631 ADAM12O43184 909 aa21.67■■□□□ 1.06
HPS4-213ENST00000483631 CLTAP09496 248 aa21.67■■□□□ 1.06
HPS4-213ENST00000483631 MYBP10242 640 aa21.67■■□□□ 1.06
HPS4-213ENST00000483631 PLCG1P19174 1290 aa21.67■■□□□ 1.06
HPS4-213ENST00000483631 TKTP29401 623 aaKnown RBP21.67■■□□□ 1.06
HPS4-213ENST00000483631 AXDND1Q5T1B0 1012 aaPredicted RBP21.67■■□□□ 1.06
HPS4-213ENST00000483631 ASTLQ6HA08 431 aaPredicted RBP21.67■■□□□ 1.06
HPS4-213ENST00000483631 CDY1Q9Y6F8 540 aa21.67■■□□□ 1.06
HPS4-213ENST00000483631 MORC2Q9Y6X9 1032 aaPredicted RBP21.67■■□□□ 1.06
HPS4-213ENST00000483631 NPHP3-ACAD11A0A0J9YXS1 232 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 VPS37CA5D8V6 355 aaPredicted RBP21.66■■□□□ 1.06
HPS4-213ENST00000483631 ANHXE9PGG2 379 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 H7C4K7 107 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 MEFVO15553 781 aaPredicted RBP21.66■■□□□ 1.06
HPS4-213ENST00000483631 FAM13AO94988 1023 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 HARSP12081 509 aaKnown RBP21.66■■□□□ 1.06
HPS4-213ENST00000483631 CYP3A5P20815 502 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 FSHRP23945 695 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 IGFBP6P24592 240 aaPredicted RBP21.66■■□□□ 1.06
HPS4-213ENST00000483631 BRCC3P46736 316 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 RASSF8Q8NHQ8 419 aa21.66■■□□□ 1.06
HPS4-213ENST00000483631 ZNF461Q8TAF7 563 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms