RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 MCF2L2Q86YR7 1114 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 CCDC146Q8IYE0 955 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 UHMK1Q8TAS1 419 aaKnown RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 FAM151AQ8WW52 585 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 TRIB2Q92519 343 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 TEKT1Q969V4 418 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 FAM84BQ96KN1 310 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 SNX27Q96L92 541 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 LRFN3Q9BTN0 628 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 EPHX3Q9H6B9 360 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 BARX1Q9HBU1 254 aaPredicted RBP4.45□□□□□ -1.7
LRCH3-217ENST00000483442 ARHGEF4Q9NR80 690 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 ATP11BQ9Y2G3 1177 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 AFG3L2Q9Y4W6 797 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 HS3ST3A1Q9Y663 406 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 TTC28Q96AY4 2481 aa4.45□□□□□ -1.7
LRCH3-217ENST00000483442 ALPK3Q96L96 1907 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 TCRBV5S4A2TA0A5A2 114 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 OVOL3O00110 214 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 KRIT1O00522 736 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 MUSKO15146 869 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 CYP7B1O75881 506 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 ERCC5P28715 1186 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-217ENST00000483442 CNGA1P29973 690 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 SELENOPP49908 381 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 SMAD2Q15796 467 aaKnown RBP4.44□□□□□ -1.7
LRCH3-217ENST00000483442 TAF7LQ5H9L4 462 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 TREML2Q5T2D2 321 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 FKBP1CQ5VVH2 108 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 YOD1Q5VVQ6 348 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-217ENST00000483442 CD276Q5ZPR3 534 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 LBX2Q6XYB7 198 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 TRIM48Q8IWZ4 208 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 C8orf58Q8NAV2 365 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 SH3RF2Q8TEC5 729 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 OSBP2Q969R2 916 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 AJUBAQ96IF1 538 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 CDK5RAP1Q96SZ6 601 aaKnown RBP4.44□□□□□ -1.7
LRCH3-217ENST00000483442 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.44□□□□□ -1.77e-7■■□□□ 13.4
LRCH3-217ENST00000483442 PLA2G12BQ9BX93 195 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 PCED1AQ9H1Q7 454 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 CNNM1Q9NRU3 951 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-217ENST00000483442 SLC45A1Q9Y2W3 748 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 SLC4A7Q9Y6M7 1214 aa4.44□□□□□ -1.7
LRCH3-217ENST00000483442 SPTBN5Q9NRC6 3674 aaKnown RBP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 CYR61O00622 381 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 PRODHO43272 600 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 GRK2P25098 689 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 GRK3P35626 688 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 UBE4AQ14139 1066 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 GCKRQ14397 625 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 NOLC1Q14978 699 aaKnown RBP eCLIP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 CCL14Q16627 93 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 FAM110CQ1W6H9 321 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 CCDC57Q2TAC2 916 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 TMEM31Q5JXX7 168 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 MAP3K21Q5TCX8 1036 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 CCDC30Q5VVM6 783 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 CDC42EP5Q6NZY7 148 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 LMBR1LQ6UX01 489 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 SLC39A5Q6ZMH5 540 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 RALYLQ86SE5 291 aaKnown RBP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 CCAR1Q8IX12 1150 aaKnown RBP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 SCYL3Q8IZE3 742 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 RNPC3Q96LT9 517 aaKnown RBP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 LRRC37BQ96QE4 947 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 TACO1Q9BSH4 297 aaKnown RBP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 TINF2Q9BSI4 451 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 MENTQ9BUN1 341 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 KATNBL1Q9H079 304 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 PRDM12Q9H4Q4 367 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 THEGQ9P2T0 379 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 AGTPBP1Q9UPW5 1226 aa4.43□□□□□ -1.7
LRCH3-217ENST00000483442 LRRFIP2Q9Y608 721 aaKnown RBP4.43□□□□□ -1.7
LRCH3-217ENST00000483442 LAMB1P07942 1786 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 DLG5Q8TDM6 1919 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 OTOFQ9HC10 1997 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 TRIM43BA6NCK2 446 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 ZNF839A8K0R7 811 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 CTNND1O60716 968 aaKnown RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 FZD7O75084 574 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 ZKSCAN1P17029 563 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 GCLCP48506 637 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 MRE11P49959 708 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 EPHA5P54756 1037 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 SPP2Q13103 211 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 CAVIN4Q5BKX8 364 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 GJC2Q5T442 439 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 RSPO2Q6UXX9 243 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 CCDC129Q6ZRS4 1044 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 G2E3Q7L622 706 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.42□□□□□ -1.7
LRCH3-217ENST00000483442 TAX1BP1Q86VP1 789 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 DOCK3Q8IZD9 2030 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 TSPYL6Q8N831 410 aa4.42□□□□□ -1.7
LRCH3-217ENST00000483442 TBC1D22AQ8WUA7 517 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms