RNA–Protein interactions for RNA: ENST00000483342.5

SNHG11-215, Transcript of small nucleolar RNA host gene 11, humanhuman

TSL 1 (best)

Gene SNHG11, Length 1,509 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG11-215ENST00000483342 GLRA4Q5JXX5 417 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 CLLU1OSQ5K130 101 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 LMBRD2Q68DH5 695 aaPredicted RBP18.37■□□□□ 0.53
SNHG11-215ENST00000483342 NT5DC4Q86YG4 428 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 WDR49Q8IV35 697 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 PLEKHO2Q8TD55 490 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 CGRRF1Q99675 332 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 ZBED2Q9BTP6 218 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 CXCL16Q9H2A7 254 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 MMRN2Q9H8L6 949 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 DERAQ9Y315 318 aa18.37■□□□□ 0.53
SNHG11-215ENST00000483342 XPOTO43592 962 aaKnown RBP18.36■□□□□ 0.53
SNHG11-215ENST00000483342 SERPINC1P01008 464 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 SCNN1GP51170 649 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 AFF1P51825 1210 aaKnown RBP18.36■□□□□ 0.53
SNHG11-215ENST00000483342 AP3M2P53677 418 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 PLCB2Q00722 1185 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 KCNH2Q12809 1159 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 MAN2A1Q16706 1144 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 TMCO2Q7Z6W1 182 aaPredicted RBP18.36■□□□□ 0.53
SNHG11-215ENST00000483342 PHOSPHO2Q8TCD6 241 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 ANKRD36BP1Q96IX9 119 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 ZMAT2Q96NC0 199 aaKnown RBP18.36■□□□□ 0.53
SNHG11-215ENST00000483342 TMEM117Q9H0C3 514 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 VPS16Q9H269 839 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 MIOSQ9NXC5 875 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 TAB2Q9NYJ8 693 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 LIMA1Q9UHB6 759 aaKnown RBP18.36■□□□□ 0.53
SNHG11-215ENST00000483342 C2CD2Q9Y426 696 aa18.36■□□□□ 0.53
SNHG11-215ENST00000483342 LRRC10BA6NIK2 292 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 TBKBP1A7MCY6 615 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 DGKIO75912 1065 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 TNNC2P02585 160 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 NFICP08651 508 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 TMEM191BP0C7N4 346 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 GATMP50440 423 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 CLDN10P78369 228 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 RNASELQ05823 741 aaKnown RBP18.35■□□□□ 0.53
SNHG11-215ENST00000483342 SHHQ15465 462 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 VWA3BQ502W6 1294 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 C9orf50Q5SZB4 431 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 GSTCDQ8NEC7 633 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 BEST2Q8NFU1 509 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 SLC35C1Q96A29 364 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 RNPC3Q96LT9 517 aaKnown RBP18.35■□□□□ 0.53
SNHG11-215ENST00000483342 CASD1Q96PB1 797 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 GDF15Q99988 308 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 SLC38A7Q9NVC3 462 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 INTS13Q9NVM9 706 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 UBQLN1Q9UMX0 589 aaKnown RBP18.35■□□□□ 0.53
SNHG11-215ENST00000483342 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
SNHG11-215ENST00000483342 PTGESO14684 152 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 PHACTR2O75167 634 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 AFPP02771 609 aaKnown RBP18.34■□□□□ 0.53
SNHG11-215ENST00000483342 ATP2A2P16615 1042 aaKnown RBP18.34■□□□□ 0.53
SNHG11-215ENST00000483342 GTF2H1P32780 548 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 GCLMP48507 274 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 COPB1P53618 953 aaKnown RBP18.34■□□□□ 0.53
SNHG11-215ENST00000483342 MCCD1P59942 119 aaPredicted RBP18.34■□□□□ 0.53
SNHG11-215ENST00000483342 UVSSAQ2YD98 709 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 FILIP1LQ4L180 1135 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 C1orf220Q5T0J3 134 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 EFCAB13Q8IY85 973 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 OR5B17Q8NGF7 314 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 RSPH1Q8WYR4 309 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 ZNF516Q92618 1163 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 FAM193BQ96PV7 902 aaPredicted RBP18.34■□□□□ 0.53
SNHG11-215ENST00000483342 SLC9A7Q96T83 725 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 YME1L1Q96TA2 773 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 NDST4Q9H3R1 872 aa18.34■□□□□ 0.53
SNHG11-215ENST00000483342 R3HCC1Q9Y3T6 440 aaKnown RBP18.34■□□□□ 0.53
SNHG11-215ENST00000483342 INPPL1O15357 1258 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 TTC3P53804 2025 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 FANCCQ00597 558 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 PPP3CAQ08209 521 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 GRIK3Q13003 919 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 BIRC3Q13489 604 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 ZBTB6Q15916 424 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 PAN2Q504Q3 1202 aaKnown RBP18.33■□□□□ 0.53
SNHG11-215ENST00000483342 C18orf25Q96B23 403 aaPredicted RBP18.33■□□□□ 0.53
SNHG11-215ENST00000483342 PPP1R10Q96QC0 940 aaKnown RBP18.33■□□□□ 0.53
SNHG11-215ENST00000483342 MRPL9Q9BYD2 267 aaKnown RBP18.33■□□□□ 0.53
SNHG11-215ENST00000483342 MTMR12Q9C0I1 747 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 TMEM8AQ9HCN3 771 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 DPP3Q9NY33 737 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 PLAGL2Q9UPG8 496 aa18.33■□□□□ 0.53
SNHG11-215ENST00000483342 CEP290O15078 2479 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 PTPRJQ12913 1337 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 N4BP1O75113 896 aaKnown RBP18.33■□□□□ 0.52
SNHG11-215ENST00000483342 GJB5O95377 273 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 C4BPAP04003 597 aaKnown RBP18.33■□□□□ 0.52
SNHG11-215ENST00000483342 FMO5P49326 533 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 UBASH3AP57075 661 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 CETN1Q12798 172 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 RASIP1Q5U651 963 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 KRT39Q6A163 491 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 SV2AQ7L0J3 742 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 HERC6Q8IVU3 1022 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 FAM84AQ96KN4 292 aa18.33■□□□□ 0.52
SNHG11-215ENST00000483342 TBC1D13Q9NVG8 400 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms