RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 GBP6Q6ZN66 633 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 OR5B17Q8NGF7 314 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 CXorf38Q8TB03 319 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 ANP32BQ92688 251 aaKnown RBP18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 IQCDQ96DY2 449 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 ZMAT2Q96NC0 199 aaKnown RBP18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 PPP1R9BQ96SB3 815 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 TTYH3Q9C0H2 523 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 PRDM5Q9NQX1 630 aaPredicted RBP18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 TMEM161AQ9NX61 479 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 DAAM1Q9Y4D1 1078 aa18.22■□□□□ 0.51
SCAMP3-207ENST00000480219 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 PTGESO14684 152 aa18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 CYP3A5P20815 502 aa18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 AKAP5P24588 427 aa18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 EXOC3L4Q17RC7 722 aa18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 TDRD10Q5VZ19 366 aaKnown RBP18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 JADE1Q6IE81 842 aa18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 RPUSD2Q8IZ73 545 aaKnown RBP18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 GSTCDQ8NEC7 633 aa18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 RNF216Q9NWF9 866 aaPredicted RBP18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 FBXL5Q9UKA1 691 aa18.21■□□□□ 0.51
SCAMP3-207ENST00000480219 MICAL3Q7RTP6 2002 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 SMIM28A0A1B0GU29 152 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 ABHD14A-ACY1A0A1B0GW23 586 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 MEIS3P2A8K0S8 358 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 RBAK-RBAKDNI3L0D1 243 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 EFCAB14O75071 495 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 ZC3H11AO75152 810 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 VNN1O95497 513 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 NFICP08651 508 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 CSF2RAP15509 400 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 PON1P27169 355 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 CETN1Q12798 172 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 TMEM132DQ14C87 1099 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 NAB2Q15742 525 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 TRAPPC11Q7Z392 1133 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 EHBP1Q8NDI1 1231 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 FBXL13Q8NEE6 735 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 CACTINQ8WUQ7 758 aaKnown RBP18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 ANKRD36BP1Q96IX9 119 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 PPP1R10Q96QC0 940 aaKnown RBP18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 NUP58Q9BVL2 599 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 EDEM3Q9BZQ6 932 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 CXCL16Q9H2A7 254 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 RSAD1Q9HA92 442 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 IL23AQ9NPF7 189 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 RNF19AQ9NV58 838 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 RAB20Q9NX57 234 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 IMPACTQ9P2X3 320 aa18.2■□□□□ 0.5
SCAMP3-207ENST00000480219 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 BAIAP3O94812 1187 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 STAU1O95793 577 aaKnown RBP18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 TTC3P53804 2025 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 TRIM14Q14142 442 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 IKBKEQ14164 716 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 LMBRD2Q68DH5 695 aaPredicted RBP18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 TRIM65Q6PJ69 517 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 C1orf127Q8N9H9 656 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 TAS1R2Q8TE23 839 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 FAXDC2Q96IV6 333 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 MTMR12Q9C0I1 747 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 GANQ9H2C0 597 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 VRTNQ9H8Y1 702 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 SIX2Q9NPC8 291 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 GCNT4Q9P109 453 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 PARP2Q9UGN5 583 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 ITGA11Q9UKX5 1188 aa18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 UBQLN1Q9UMX0 589 aaKnown RBP18.19■□□□□ 0.5
SCAMP3-207ENST00000480219 A0A1W2PQJ5 194 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 ARL5CA6NH57 179 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 XPOTO43592 962 aaKnown RBP18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 OFD1O75665 1012 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 NOL4O94818 638 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 TNNC2P02585 160 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 TMEM191BP0C7N4 346 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 SLC9A1P19634 815 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 RFX1P22670 979 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 CCDC173Q0VFZ6 552 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 PPIGQ13427 754 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 ARID5BQ14865 1188 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 DEFB128Q7Z7B8 93 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 NPAS4Q8IUM7 802 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 SEMA4DQ92854 862 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 LPPQ93052 612 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 FAM212AQ96EL1 285 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 KIF12Q96FN5 646 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 APOL6Q9BWW8 343 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 INTS2Q9H0H0 1204 aaKnown RBP18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 PRKAG2Q9UGJ0 569 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 SIX4Q9UIU6 781 aa18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.18■□□□□ 0.5
SCAMP3-207ENST00000480219 ANO9A1A5B4 782 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 ASS1P00966 412 aaKnown RBP18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 HLA-DRAP01903 254 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 GYPCP04921 128 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 LRPAP1P30533 357 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 MLH1P40692 756 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 KLK7P49862 253 aa18.17■□□□□ 0.5
SCAMP3-207ENST00000480219 TFAMQ00059 246 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms