RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 RABGGTAQ92696 567 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 SNX27Q96L92 541 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 CLSTN3Q9BQT9 956 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 PIDD1Q9HB75 910 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 STK17AQ9UEE5 414 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 RAPGEFL1Q9UHV5 662 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 BACE2Q9Y5Z0 518 aa16.46■□□□□ 0.23
PRKN-207ENST00000479615 SYN3O14994 580 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 TRAK2O60296 914 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 TBCAO75347 108 aaKnown RBP16.45■□□□□ 0.22
PRKN-207ENST00000479615 ZMYND10O75800 440 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 POU2F2P09086 479 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 CLTAP09496 248 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 PLCG1P19174 1290 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 SP100P23497 879 aaPredicted RBP16.45■□□□□ 0.22
PRKN-207ENST00000479615 OSTNP61366 133 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 RAB33AQ14088 237 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 GLRA4Q5JXX5 417 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 KANK3Q6NY19 840 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 CEP120Q8N960 986 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 KRI1Q8N9T8 703 aaKnown RBP16.45■□□□□ 0.22
PRKN-207ENST00000479615 HASPINQ8TF76 798 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 BICD1Q96G01 975 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 B3GALT6Q96L58 329 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 REEP2Q9BRK0 252 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 BLOC1S4Q9NUP1 217 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 ANKFY1Q9P2R3 1169 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 LIMD1Q9UGP4 676 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 CDH22Q9UJ99 828 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 FBXW11Q9UKB1 542 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 TBX20Q9UMR3 447 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 ZFP37Q9Y6Q3 630 aaPredicted RBP16.45■□□□□ 0.22
PRKN-207ENST00000479615 C5orf42Q9H799 3197 aa16.45■□□□□ 0.22
PRKN-207ENST00000479615 PODXLO00592 558 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 HNRNPDLO14979 420 aaKnown RBP16.44■□□□□ 0.22
PRKN-207ENST00000479615 XPOTO43592 962 aaKnown RBP16.44■□□□□ 0.22
PRKN-207ENST00000479615 PIGRP01833 764 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 PAX3P23760 479 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 MATR3P43243 847 aaKnown RBP eCLIP16.44■□□□□ 0.222e-6■■■■□ 23.9
PRKN-207ENST00000479615 LIG4P49917 911 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 RESTQ13127 1097 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 KARSQ15046 597 aaKnown RBP16.44■□□□□ 0.22
PRKN-207ENST00000479615 PTPAQ15257 358 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 PRSS55Q6UWB4 352 aaPredicted RBP16.44■□□□□ 0.22
PRKN-207ENST00000479615 CD302Q8IX05 232 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 SNX21Q969T3 373 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 ASIC4Q96FT7 647 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 ST6GALNAC4Q9H4F1 302 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 MTRRQ9UBK8 725 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 CACNG4Q9UBN1 327 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 NUB1Q9Y5A7 615 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 CLUHO75153 1309 aa16.44■□□□□ 0.22
PRKN-207ENST00000479615 H7C4K7 107 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 STX6O43752 255 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 XYLBO75191 536 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 RFPL2O75678 378 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 RPL17P18621 184 aaKnown RBP16.43■□□□□ 0.22
PRKN-207ENST00000479615 CYP3A5P20815 502 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 POU5F1Q01860 360 aaKnown RBP16.43■□□□□ 0.22
PRKN-207ENST00000479615 TDGQ13569 410 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 MCM6Q14566 821 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 SLC10A6Q3KNW5 377 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 CCDC73Q6ZRK6 1079 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 ZNF707Q96C28 371 aaPredicted RBP16.43■□□□□ 0.22
PRKN-207ENST00000479615 OXCT2Q9BYC2 517 aaPredicted RBP16.43■□□□□ 0.22
PRKN-207ENST00000479615 IRF2BPLQ9H1B7 796 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 CXCL16Q9H2A7 254 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 EPS15L1Q9UBC2 864 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 SEL1LQ9UBV2 794 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 MAFFQ9ULX9 164 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 CLIC4Q9Y696 253 aa16.43■□□□□ 0.22
PRKN-207ENST00000479615 NPHP3-ACAD11A0A0J9YXS1 232 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 K7ENM7 598 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 SPATA31D3P0C874 917 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 HARSP12081 509 aaKnown RBP16.42■□□□□ 0.22
PRKN-207ENST00000479615 OR1D2P34982 312 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 GTF2BQ00403 316 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
PRKN-207ENST00000479615 GRIN1Q05586 938 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 DHX8Q14562 1220 aaKnown RBP16.42■□□□□ 0.22
PRKN-207ENST00000479615 SLC39A14Q15043 492 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 PPM1LQ5SGD2 360 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 RRAGBQ5VZM2 374 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 SLFN12LQ6IEE8 588 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 SPATA31D4Q6ZUB0 917 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 GLYCTKQ8IVS8 523 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 APPL2Q8NEU8 664 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 HVCN1Q96D96 273 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 ZBTB45Q96K62 511 aaPredicted RBP16.42■□□□□ 0.22
PRKN-207ENST00000479615 ZMAT2Q96NC0 199 aaKnown RBP16.42■□□□□ 0.22
PRKN-207ENST00000479615 FBXO2Q9UK22 296 aaPredicted RBP16.42■□□□□ 0.22
PRKN-207ENST00000479615 MTMR6Q9Y217 621 aa16.42■□□□□ 0.22
PRKN-207ENST00000479615 TECTAO75443 2155 aa16.41■□□□□ 0.22
PRKN-207ENST00000479615 TTC26A0AVF1 554 aa16.41■□□□□ 0.22
PRKN-207ENST00000479615 OGTO15294 1046 aa16.41■□□□□ 0.22
PRKN-207ENST00000479615 C8AP07357 584 aa16.41■□□□□ 0.22
PRKN-207ENST00000479615 MARCKSP29966 332 aaPredicted RBP16.41■□□□□ 0.22
PRKN-207ENST00000479615 GBP2P32456 591 aaPredicted RBP16.41■□□□□ 0.22
PRKN-207ENST00000479615 PPP2R3AQ06190 1150 aa16.41■□□□□ 0.22
PRKN-207ENST00000479615 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms