RNA–Protein interactions for RNA: ENST00000479584.1

CDK5RAP2-211, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 3

Gene CDK5RAP2, Length 611 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-211	ENST00000479584	ALKAL1	Q6UXT8	129 aa		13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	TAS1R3	Q7RTX0	852 aa		13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	HAUS6	Q7Z4H7	955 aa		13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	KRI1	Q8N9T8	703 aa	Known RBP	13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	SMG7	Q92540	1137 aa	Known RBP	13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	RAD54L	Q92698	747 aa		13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	NUB1	Q9Y5A7	615 aa		13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	CLIC4	Q9Y696	253 aa		13.47	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584		K7ELQ4	463 aa	Predicted RBP	13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	HSP90AA1	P07900	732 aa	Known RBP	13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	CLTA	P09496	248 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	RPL17	P18621	184 aa	Known RBP	13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	GBP2	P32456	591 aa	Predicted RBP	13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	NCKAP1L	P55160	1127 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	MCM6	Q14566	821 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	XKR4	Q5GH76	650 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	LILRA6	Q6PI73	481 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	ANKS3	Q6ZW76	656 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	CEP120	Q8N960	986 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	LNX1	Q8TBB1	728 aa	Predicted RBP	13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	LARP4B	Q92615	738 aa	Known RBP	13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	SNX27	Q96L92	541 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	PRRX2	Q99811	253 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	REEP2	Q9BRK0	252 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	PRKD2	Q9BZL6	878 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	CCSER1	Q9C0I3	900 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	CXCL16	Q9H2A7	254 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	PLEKHA5	Q9HAU0	1116 aa		13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	WDR6	Q9NNW5	1121 aa	Known RBP	13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
CDK5RAP2-211	ENST00000479584	TRIO	O75962	3097 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584		K7ENM7	598 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	PODXL	O00592	558 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	HNRNPDL	O14979	420 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	TRAK2	O60296	914 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	XYLB	O75191	536 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	RFPL2	O75678	378 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ZMYND10	O75800	440 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	PDIA4	P13667	645 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	FGFR3	P22607	806 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	MARCKS	P29966	332 aa	Predicted RBP	13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	CEBPZ	Q03701	1054 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	MCL1	Q07820	350 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	PPM1L	Q5SGD2	360 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	RRAGB	Q5VZM2	374 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	RTL10	Q7L3V2	364 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	FBXL6	Q8N531	539 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ZBTB45	Q96K62	511 aa	Predicted RBP	13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	CLSTN3	Q9BQT9	956 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	CNTN3	Q9P232	1028 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	IGSF9	Q9P2J2	1179 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	STK17A	Q9UEE5	414 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	TBX20	Q9UMR3	447 aa		13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	SRPRB	Q9Y5M8	271 aa	Known RBP	13.45	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584		H7C4K7	107 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	XPOT	O43592	962 aa	Known RBP	13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	STX6	O43752	255 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ASGR2	P07307	311 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	OR1D2	P34982	312 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	TDG	Q13569	410 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	RAB33A	Q14088	237 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	UVSSA	Q2YD98	709 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	SV2B	Q7L1I2	683 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	EPSTI1	Q96J88	318 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	TSPAN18	Q96SJ8	248 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	GOLGA2P5	Q9HBQ8	144 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	BLOC1S4	Q9NUP1	217 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	BACE2	Q9Y5Z0	518 aa		13.44	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	CLUH	O75153	1309 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ABLIM1	O14639	778 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	SYN3	O14994	580 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ELF1	P32519	619 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ZNF131	P52739	623 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	GRIN1	Q05586	938 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	PPP2R3A	Q06190	1150 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	REST	Q13127	1097 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	PTPA	Q15257	358 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	SLC10A6	Q3KNW5	377 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	SEZ6	Q53EL9	994 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	SPECC1	Q5M775	1068 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	SLFN12L	Q6IEE8	588 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	CCDC73	Q6ZRK6	1079 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	HSCB	Q8IWL3	235 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	APPL2	Q8NEU8	664 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	KCNN1	Q92952	543 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	NXPE3	Q969Y0	559 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ZNF707	Q96C28	371 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ZNF396	Q96N95	335 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ZMAT2	Q96NC0	199 aa	Known RBP	13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	MSTO1	Q9BUK6	570 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	MFSD1	Q9H3U5	465 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	RPF1	Q9H9Y2	349 aa	Known RBP	13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	MTRR	Q9UBK8	725 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	FBXO2	Q9UK22	296 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	FBXW11	Q9UKB1	542 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	POLI	Q9UNA4	740 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	CDY1	Q9Y6F8	540 aa		13.43	□□□□□ -0.26
CDK5RAP2-211	ENST00000479584	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.43	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms