RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 C8AP07357 584 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 CFHP08603 1231 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 GUCY2CP25092 1073 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 MATR3P43243 847 aaKnown RBP eCLIP19.05■□□□□ 0.648e-7■■■■■ 31.9
ECHDC1-216ENST00000479525 YARSP54577 528 aaKnown RBP19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 MCM6Q14566 821 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 UPP1Q16831 310 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 MPZL3Q6UWV2 235 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 GPBP1Q86WP2 473 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 TMEM161BQ8NDZ6 487 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 DDX27Q96GQ7 796 aaKnown RBP19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 PRKD2Q9BZL6 878 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 MFSD1Q9H3U5 465 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 PLEKHA4Q9H4M7 779 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 CDY1Q9Y6F8 540 aa19.05■□□□□ 0.64
ECHDC1-216ENST00000479525 USP34Q70CQ2 3546 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 PLS3P13797 630 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 PROZP22891 400 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 ARPP19P56211 112 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 TDGQ13569 410 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 SF3A1Q15459 793 aaKnown RBP19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 SLC7A14Q8TBB6 771 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 ACAP3Q96P50 834 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 REEP2Q9BRK0 252 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 ZHX3Q9H4I2 956 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 BLOC1S4Q9NUP1 217 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 TUBGCP4Q9UGJ1 667 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 CA14Q9ULX7 337 aa19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.04■□□□□ 0.64
ECHDC1-216ENST00000479525 MYO15AQ9UKN7 3530 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 PODXLO00592 558 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 PI15O43692 258 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 CXCL8P10145 99 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 MAPTP10636 758 aaKnown RBP19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 PLCG1P19174 1290 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 FGFR3P22607 806 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 TNFSF9P41273 254 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 GUCY2FP51841 1108 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 STRN3Q13033 797 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 NOLC1Q14978 699 aaKnown RBP eCLIP19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 PPM1LQ5SGD2 360 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 ZBTB41Q5SVQ8 909 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 LIN9Q5TKA1 542 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 CWF19L1Q69YN2 538 aaKnown RBP19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 ALKAL1Q6UXT8 129 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 USP49Q70CQ1 688 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 RASSF8Q8NHQ8 419 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 BICD1Q96G01 975 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 RPP25Q9BUL9 199 aaKnown RBP19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 FBXL21Q9UKT6 434 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 DUSP12Q9UNI6 340 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 CLIC4Q9Y696 253 aa19.03■□□□□ 0.64
ECHDC1-216ENST00000479525 MCF2P10911 925 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 MARCKSP29966 332 aaPredicted RBP19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 CEBPZQ03701 1054 aaKnown RBP19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 SLC10A6Q3KNW5 377 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 AXDND1Q5T1B0 1012 aaPredicted RBP19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 ELMSAN1Q6PJG2 1045 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 DCLRE1AQ6PJP8 1040 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 SIX5Q8N196 739 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 ITFG1Q8TB96 612 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 ING5Q8WYH8 240 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 IKZF4Q9H2S9 585 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 ZDHHC7Q9NXF8 308 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 MTRRQ9UBK8 725 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 DPP7Q9UHL4 492 aa19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 RBM19Q9Y4C8 960 aaKnown RBP19.02■□□□□ 0.64
ECHDC1-216ENST00000479525 TCHHQ07283 1943 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 FSHRP23945 695 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 UBA7P41226 1012 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 MCM2P49736 904 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 PTPN5P54829 565 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 CREMQ03060 361 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 ELAVL2Q12926 359 aaKnown RBP19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 XKR4Q5GH76 650 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 ARL6IP4Q66PJ3 421 aaKnown RBP19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 APBB1IPQ7Z5R6 666 aaPredicted RBP19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 STAMQ92783 540 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 CALML4Q96GE6 196 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 KCNH6Q9H252 994 aa19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 TOPORSQ9NS56 1045 aaPredicted RBP19.01■□□□□ 0.63
ECHDC1-216ENST00000479525 TISP43B9A030 160 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 TMEM189-UBE2V1I3L0A0 370 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 K7ENM7 598 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 NPR3P17342 541 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 CDR1P51861 262 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 VARS2Q5ST30 1063 aaKnown RBP19■□□□□ 0.63
ECHDC1-216ENST00000479525 HAUS6Q7Z4H7 955 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 MYCT1Q8N699 235 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 HDAC7Q8WUI4 952 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 SPIRE2Q8WWL2 714 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 EPSTI1Q96J88 318 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 CNTN3Q9P232 1028 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 NUMBLQ9Y6R0 609 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 DMDP11532 3685 aa19■□□□□ 0.63
ECHDC1-216ENST00000479525 TSC2P49815 1807 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 KRBA1A5PL33 1030 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 STK25O00506 426 aa18.99■□□□□ 0.63
ECHDC1-216ENST00000479525 TOM1L1O75674 476 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms