RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 SMAD4Q13485 552 aaKnown RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 KCNC3Q14003 757 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 EMC2Q15006 297 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 CALCRLQ16602 461 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 DBN1Q16643 649 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 XKR9Q5GH70 373 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 UBXN11Q5T124 520 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 LCE2CQ5TA81 110 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 TPH2Q8IWU9 490 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 ADHFE1Q8IWW8 467 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 ETFBKMTQ8IXQ9 262 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 SLFN12Q8IYM2 578 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 ABI1Q8IZP0 508 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 SLC39A11Q8N1S5 342 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 VWA5B2Q8N398 1253 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 MICAL1Q8TDZ2 1067 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 BCL7CQ8WUZ0 217 aaPredicted RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 SLC7A3Q8WY07 619 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 MRPS27Q92552 414 aaKnown RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 EDEM1Q92611 657 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 ZNF837Q96EG3 531 aaPredicted RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 ZNF558Q96NG5 402 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 EIF2AK1Q9BQI3 630 aaKnown RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 C1QTNF1Q9BXJ1 281 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 PIF1Q9H611 641 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 ZSWIM4Q9H7M6 989 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 TLE6Q9H808 572 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 TTC12Q9H892 705 aaPredicted RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 AGPAT5Q9NUQ2 364 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 FAM105AQ9NUU6 356 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 CD207Q9UJ71 328 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 PIN4Q9Y237 131 aaKnown RBP8.1□□□□□ -1.11
SSR1-206ENST00000479365 LZTS1Q9Y250 596 aa8.1□□□□□ -1.11
SSR1-206ENST00000479365 MARCH6O60337 910 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 NEMFO60524 1076 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 DKC1O60832 514 aaKnown RBP eCLIP8.09□□□□□ -1.11
SSR1-206ENST00000479365 ZNF623O75123 536 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 OFD1O75665 1012 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 LYPLA2O95372 231 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 BAG4O95429 457 aaKnown RBP8.09□□□□□ -1.11
SSR1-206ENST00000479365 AFF1P51825 1210 aaKnown RBP8.09□□□□□ -1.11
SSR1-206ENST00000479365 ARID5AQ03989 594 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 COASYQ13057 564 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 DUSP6Q16828 381 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 ZNF394Q53GI3 561 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 PLPP4Q5VZY2 271 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 TWF2Q6IBS0 349 aaKnown RBP8.09□□□□□ -1.11
SSR1-206ENST00000479365 AGMOQ6ZNB7 445 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 CATSPER4Q7RTX7 472 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 FERMT3Q86UX7 667 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 SMRP1Q8NCR6 262 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 ASAP3Q8TDY4 903 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 PSPC1Q8WXF1 523 aaKnown RBP8.09□□□□□ -1.11
SSR1-206ENST00000479365 TCF25Q9BQ70 676 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 JPH2Q9BR39 696 aaPredicted RBP8.09□□□□□ -1.11
SSR1-206ENST00000479365 PHACTR1Q9C0D0 580 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 NRDE2Q9H7Z3 1164 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 TBC1D13Q9NVG8 400 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 DACT1Q9NYF0 836 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 ZDHHC3Q9NYG2 299 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 SPG21Q9NZD8 308 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 DNAJB4Q9UDY4 337 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 PRKAG3Q9UGI9 489 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 PCDHA12Q9UN75 941 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 LIMCH1Q9UPQ0 1083 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 INPP5FQ9Y2H2 1132 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 PPME1Q9Y570 386 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 PCDHB2Q9Y5E7 798 aa8.09□□□□□ -1.11
SSR1-206ENST00000479365 C5orf42Q9H799 3197 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 TSPAN1O60635 241 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 MED24O75448 989 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 SPATA31C1P0DKV0 1188 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 MCM7P33993 719 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 PPM1AP35813 382 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 ARL2P36404 184 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 SLC11A1P49279 550 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 RARRES1P49788 294 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 RAB27AP51159 221 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 BCAR1P56945 870 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 PTENP60484 403 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 DNM1Q05193 864 aaKnown RBP8.08□□□□□ -1.12
SSR1-206ENST00000479365 CAPSQ13938 189 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 TRIM29Q14134 588 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 ARSJQ5FYB0 599 aaPredicted RBP8.08□□□□□ -1.12
SSR1-206ENST00000479365 TMEM31Q5JXX7 168 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 SYCE2Q6PIF2 218 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 OTUD6AQ7L8S5 288 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 SRGAP1Q7Z6B7 1085 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 MRPL10Q7Z7H8 261 aaKnown RBP8.08□□□□□ -1.12
SSR1-206ENST00000479365 ZNF280BQ86YH2 543 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 NPAS3Q8IXF0 933 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 ALDH16A1Q8IZ83 802 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 RNF149Q8NC42 400 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 SMG8Q8ND04 991 aaKnown RBP8.08□□□□□ -1.12
SSR1-206ENST00000479365 FEZF2Q8TBJ5 459 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 PIGOQ8TEQ8 1089 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 AUTS2Q8WXX7 1259 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 PPP2R3CQ969Q6 453 aa8.08□□□□□ -1.12
SSR1-206ENST00000479365 VN1R3Q9BXE9 311 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms