RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 HINFPQ9BQA5 517 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 RPP25Q9BUL9 199 aaKnown RBP14.55□□□□□ -0.08
VCL-205ENST00000478896 FOXQ1Q9C009 403 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 HCFC1R1Q9NWW0 138 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
VCL-205ENST00000478896 TNFSF13BQ9Y275 285 aa14.55□□□□□ -0.08
VCL-205ENST00000478896 I3L4J1 428 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 LMNAP02545 664 aaKnown RBP14.54□□□□□ -0.08
VCL-205ENST00000478896 BRCC3P46736 316 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 SNW1Q13573 536 aaKnown RBP14.54□□□□□ -0.08
VCL-205ENST00000478896 UPP1Q16831 310 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 CEP120Q8N960 986 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 ING5Q8WYH8 240 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 DDX27Q96GQ7 796 aaKnown RBP14.54□□□□□ -0.08
VCL-205ENST00000478896 KXD1Q9BQD3 176 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 MRPL4Q9BYD3 311 aaKnown RBP14.54□□□□□ -0.08
VCL-205ENST00000478896 CDT1Q9H211 546 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 SEMA4AQ9H3S1 761 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 SLC38A7Q9NVC3 462 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 DNMT3BQ9UBC3 853 aaKnown RBP14.54□□□□□ -0.08
VCL-205ENST00000478896 R4GN57 208 aa14.54□□□□□ -0.08
VCL-205ENST00000478896 MYH11P35749 1972 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 SMIM28A0A1B0GU29 152 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 E9PMD0 336 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 HIP1RO75146 1068 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 LRG1P02750 347 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 POU2F2P09086 479 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 HARSP12081 509 aaKnown RBP14.53□□□□□ -0.08
VCL-205ENST00000478896 ELF1P32519 619 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 GRM5P41594 1212 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 ID4P47928 161 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 NPTX2P47972 431 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 STARD6P59095 220 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 FOXK2Q01167 660 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 PFKPQ01813 784 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 UBXN2BQ14CS0 331 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 MLF2Q15773 248 aaPredicted RBP14.53□□□□□ -0.08
VCL-205ENST00000478896 KRT79Q5XKE5 535 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 C1orf210Q8IVY1 113 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 NPAS3Q8IXF0 933 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 C3orf58Q8NDZ4 430 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 ZSCAN31Q96LW9 406 aaPredicted RBP14.53□□□□□ -0.08
VCL-205ENST00000478896 DRC1Q96MC2 740 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 TCHPQ9BT92 498 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 KMT5AQ9NQR1 393 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 SH2B1Q9NRF2 756 aaPredicted RBP14.53□□□□□ -0.08
VCL-205ENST00000478896 DNM3Q9UQ16 869 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 MRPS23Q9Y3D9 190 aaKnown RBP14.53□□□□□ -0.08
VCL-205ENST00000478896 NUB1Q9Y5A7 615 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 BACE2Q9Y5Z0 518 aa14.53□□□□□ -0.08
VCL-205ENST00000478896 COL4A3Q01955 1670 aa14.52□□□□□ -0.08
VCL-205ENST00000478896 KANSL1LA0AUZ9 987 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 PODXLO00592 558 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 PRRG1O14668 218 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 SEC24BO95487 1268 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 RHOP08100 348 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 IGFBP6P24592 240 aaPredicted RBP14.52□□□□□ -0.09
VCL-205ENST00000478896 ARPP19P56211 112 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 ROR1Q01973 937 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 PTGDRQ13258 359 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 PDIA5Q14554 519 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 RTL10Q7L3V2 364 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 IGSF22Q8N9C0 903 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 ACAP3Q96P50 834 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 ACO2Q99798 780 aaKnown RBP14.52□□□□□ -0.09
VCL-205ENST00000478896 BCO2Q9BYV7 579 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 TMEM134Q9H6X4 195 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 DLGAP2Q9P1A6 1054 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 KCNH3Q9ULD8 1083 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 PCDHB6Q9Y5E3 794 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 NOTCH4Q99466 2003 aa14.52□□□□□ -0.09
VCL-205ENST00000478896 PTPRZ1P23471 2315 aaPredicted RBP14.52□□□□□ -0.09
VCL-205ENST00000478896 PDCD11Q14690 1871 aaKnown RBP14.51□□□□□ -0.09
VCL-205ENST00000478896 PATJQ8NI35 1801 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 PP2D1A8MPX8 630 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 LRRN2O75325 713 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 SP9P0CG40 484 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 PRKCQQ04759 706 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 SOX4Q06945 474 aaPredicted RBP14.51□□□□□ -0.09
VCL-205ENST00000478896 STRN3Q13033 797 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 ZRSR1Q15695 479 aaKnown RBP14.51□□□□□ -0.09
VCL-205ENST00000478896 SLC44A4Q53GD3 710 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 VARS2Q5ST30 1063 aaKnown RBP14.51□□□□□ -0.09
VCL-205ENST00000478896 RSPO2Q6UXX9 243 aaPredicted RBP14.51□□□□□ -0.09
VCL-205ENST00000478896 C4orf32Q8N8J7 132 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 MCRS1Q96EZ8 462 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 RUSC1Q9BVN2 902 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 TARS2Q9BW92 718 aaKnown RBP14.51□□□□□ -0.09
VCL-205ENST00000478896 SPATA6Q9NWH7 488 aaPredicted RBP14.51□□□□□ -0.09
VCL-205ENST00000478896 ARHGAP28Q9P2N2 729 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 ANKFY1Q9P2R3 1169 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 FANCMQ8IYD8 2048 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 FAM186AA6NE01 2351 aa14.51□□□□□ -0.09
VCL-205ENST00000478896 WDR27A2RRH5 827 aa14.5□□□□□ -0.09
VCL-205ENST00000478896 H7C4K7 107 aa14.5□□□□□ -0.09
VCL-205ENST00000478896 LAD1O00515 517 aa14.5□□□□□ -0.09
VCL-205ENST00000478896 SYN3O14994 580 aa14.5□□□□□ -0.09
VCL-205ENST00000478896 SLC16A4O15374 487 aa14.5□□□□□ -0.09
VCL-205ENST00000478896 LAMTOR5O43504 91 aa14.5□□□□□ -0.09
VCL-205ENST00000478896 MCF2P10911 925 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms