RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 NGRNQ9NPE2 291 aaKnown RBP7.06□□□□□ -1.28
LINC00173-202ENST00000477702 WNT16Q9UBV4 365 aa7.06□□□□□ -1.28
LINC00173-202ENST00000477702 PADI3Q9ULW8 664 aa7.06□□□□□ -1.28
LINC00173-202ENST00000477702 PCDHB7Q9Y5E2 793 aa7.06□□□□□ -1.28
LINC00173-202ENST00000477702 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.06□□□□□ -1.28
LINC00173-202ENST00000477702 BPTFQ12830 3046 aa7.06□□□□□ -1.28
LINC00173-202ENST00000477702 ABCB11O95342 1321 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 FGFR1P11362 822 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 TCF3P15923 654 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 MARK3P27448 753 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 HOXA13P31271 388 aaPredicted RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 GBP2P32456 591 aaPredicted RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 SARSP49591 514 aaKnown RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 IGBP1P78318 339 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 CSTF1Q05048 431 aaKnown RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 FAM160A1Q05DH4 1040 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 PPFIA1Q13136 1202 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 PAK2Q13177 524 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 CDC37Q16543 378 aaPredicted RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 LPAL2Q16609 132 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 RRP12Q5JTH9 1297 aaKnown RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 ZKSCAN2Q63HK3 967 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 KCNV1Q6PIU1 500 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 AGMOQ6ZNB7 445 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 CCDC149Q6ZUS6 474 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 CYFIP1Q7L576 1253 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 HS2ST1Q7LGA3 356 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 NT5DC4Q86YG4 428 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 MCF2L2Q86YR7 1114 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 MRPL43Q8N983 215 aaKnown RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 ST13P5Q8NFI4 369 aaPredicted RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 GPBAR1Q8TDU6 330 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 WFDC12Q8WWY7 111 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 AUTS2Q8WXX7 1259 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 SEC62Q99442 399 aaKnown RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 GPR20Q99678 358 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 PDCD2LQ9BRP1 358 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 RSRP1Q9BUV0 290 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 FTHL17Q9BXU8 183 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 CWH43Q9H720 699 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 METTL5Q9NRN9 209 aaKnown RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 TOMM22Q9NS69 142 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 SPATA6Q9NWH7 488 aaPredicted RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 ZNF215Q9UL58 517 aaPredicted RBP7.05□□□□□ -1.28
LINC00173-202ENST00000477702 LZTS1Q9Y250 596 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 AKAP13Q12802 2813 aa7.05□□□□□ -1.28
LINC00173-202ENST00000477702 NRCAMQ92823 1304 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 C9orf172C9J069 976 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 SLC30A4O14863 429 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 MGEA5O60502 916 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 CXCL14O95715 111 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 PF4P02776 101 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 PROS1P07225 676 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 RLBP1P12271 317 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 DRD2P14416 443 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 LAG3P18627 525 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 PMLP29590 882 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 NOVP48745 357 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 RACK1P63244 317 aaKnown RBP7.04□□□□□ -1.28
LINC00173-202ENST00000477702 SMC1AQ14683 1233 aaKnown RBP7.04□□□□□ -1.28
LINC00173-202ENST00000477702 N4BP2L1Q5TBK1 243 aaPredicted RBP7.04□□□□□ -1.28
LINC00173-202ENST00000477702 KCNT2Q6UVM3 1135 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 CABP7Q86V35 215 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 VSIG10LQ86VR7 867 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 RELL1Q8IUW5 271 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 SLC44A3Q8N4M1 653 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 KBTBD3Q8NAB2 608 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 GAL3ST3Q96A11 431 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 RHOVQ96L33 236 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 TMEM74Q96NL1 305 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 TMPRSS13Q9BYE2 586 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 AKTIPQ9H8T0 292 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 VAT1LQ9HCJ6 419 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 ARHGEF3Q9NR81 526 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 IGSF9Q9P2J2 1179 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 TUBE1Q9UJT0 475 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 MRPL11Q9Y3B7 192 aaKnown RBP7.04□□□□□ -1.28
LINC00173-202ENST00000477702 IGSF10Q6WRI0 2623 aa7.04□□□□□ -1.28
LINC00173-202ENST00000477702 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.03□□□□□ -1.28
LINC00173-202ENST00000477702 DENND3A2RUS2 1198 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 LAMTOR5O43504 91 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 DHX16O60231 1041 aaKnown RBP7.03□□□□□ -1.28
LINC00173-202ENST00000477702 N4BP1O75113 896 aaKnown RBP7.03□□□□□ -1.28
LINC00173-202ENST00000477702 C1QTNF9P0C862 333 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 TGFB3P10600 412 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 NCLP19338 710 aaKnown RBP7.03□□□□□ -1.28
LINC00173-202ENST00000477702 CCND2P30279 289 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 KRT17Q04695 432 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 RAD51AP2Q09MP3 1159 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 PGM5Q15124 567 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 QRICH1Q2TAL8 776 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 MARCH8Q5T0T0 291 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 TSHZ3Q63HK5 1081 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 DCLRE1AQ6PJP8 1040 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 TSSK4Q6SA08 328 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 METTL7BQ6UX53 244 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 BNC2Q6ZN30 1099 aaPredicted RBP7.03□□□□□ -1.28
LINC00173-202ENST00000477702 LRRC55Q6ZSA7 311 aa7.03□□□□□ -1.28
LINC00173-202ENST00000477702 FTSJ3Q8IY81 847 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms