RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 LILRA3Q8N6C8 439 aaPredicted RBP3.39□□□□□ -1.87
CACUL1-202ENST00000477583 SUPT20HQ8NEM7 779 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 OR2I1PQ8NGU4 316 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 JPH3Q8WXH2 748 aaPredicted RBP3.39□□□□□ -1.87
CACUL1-202ENST00000477583 HOXB13Q92826 284 aaPredicted RBP3.39□□□□□ -1.87
CACUL1-202ENST00000477583 COA7Q96BR5 231 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 HSPBAP1Q96EW2 488 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 MYEOVQ96EZ4 313 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 SLC46A2Q9BY10 475 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 CDH19Q9H159 772 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 KCNH6Q9H252 994 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 SYNPO2LQ9H987 977 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 TCEAL9Q9UHQ7 104 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 INTUQ9ULD6 942 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 ANKRD6Q9Y2G4 727 aa3.39□□□□□ -1.87
CACUL1-202ENST00000477583 HOXA3O43365 443 aaPredicted RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 LPXNO60711 386 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 PHF2O75151 1096 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 SCGB1D2O95969 90 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 HMGB1P09429 215 aaKnown RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 CT47B1P0C2W7 299 aaPredicted RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 EDNRBP24530 442 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 ZEB1P37275 1124 aaPredicted RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 CASRP41180 1078 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 WASP42768 502 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 SLC16A1P53985 500 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 ADKP55263 362 aaKnown RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 WNT3AP56704 352 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 DUSP2Q05923 314 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 MGAT2Q10469 447 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 MST1LQ2TV78 715 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 METTL24Q5JXM2 366 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 FAM180AQ6UWF9 173 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 RD3Q7Z3Z2 195 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 FAM83AQ86UY5 434 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 MIER2Q8N344 545 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 ZNF480Q8WV37 535 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 TSR2Q969E8 191 aaKnown RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 CAMKK2Q96RR4 588 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 PDCD2LQ9BRP1 358 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 NDC1Q9BTX1 674 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 CPEB1Q9BZB8 566 aaKnown RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 SERHL2Q9H4I8 314 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 GPRC5DQ9NZD1 345 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 TRPM5Q9NZQ8 1165 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 ANKFY1Q9P2R3 1169 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 SAP30BPQ9UHR5 308 aaKnown RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 NOB1Q9ULX3 412 aaKnown RBP3.38□□□□□ -1.87
CACUL1-202ENST00000477583 LIMCH1Q9UPQ0 1083 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 IPPQ9Y573 584 aa3.38□□□□□ -1.87
CACUL1-202ENST00000477583 CCDC154A6NI56 674 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 AHRRA9YTQ3 701 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 ADCY6O43306 1168 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 HTRA2O43464 458 aaPredicted RBP3.37□□□□□ -1.87
CACUL1-202ENST00000477583 TSPAN6O43657 245 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 ITGA10O75578 1167 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 RFPL1O75677 317 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 PARNO95453 639 aaKnown RBP3.37□□□□□ -1.87
CACUL1-202ENST00000477583 ECHS1P30084 290 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 APOBEC3AP31941 199 aaPredicted RBP3.37□□□□□ -1.87
CACUL1-202ENST00000477583 AVPR1BP47901 424 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 SLC6A9P48067 706 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 CLK3P49761 638 aaKnown RBP3.37□□□□□ -1.87
CACUL1-202ENST00000477583 PTTG1IPP53801 180 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 FAM189BP81408 668 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 VPS72Q15906 364 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 C3orf36Q3SXR2 165 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 COLEC12Q5KU26 742 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 GDF7Q7Z4P5 450 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 FMNL3Q8IVF7 1028 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 TPH2Q8IWU9 490 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 CHPFQ8IZ52 775 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 PQLC1Q8N2U9 271 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 LCORLQ8N3X6 602 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 REPS2Q8NFH8 660 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 FBXO18Q8NFZ0 1043 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 OR52N2Q8NGI0 321 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 OR5M3Q8NGP4 307 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.37□□□□□ -1.87
CACUL1-202ENST00000477583 MDM1Q8TC05 714 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 IL17RAQ96F46 866 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 WDR11Q9BZH6 1224 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 ENKD1Q9H0I2 346 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 HDAC5Q9UQL6 1122 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 SIK3Q9Y2K2 1263 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 COX11Q9Y6N1 276 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 SPATA31A6Q5VVP1 1343 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 ZMYM3Q14202 1370 aa3.37□□□□□ -1.87
CACUL1-202ENST00000477583 GAGE12BA1L429 117 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 GAGE12HA6NDE8 117 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 FAM171A2A8MVW0 826 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 RNASET2O00584 256 aaKnown RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 WNT10BO00744 389 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 PRPF3O43395 683 aaKnown RBP3.36□□□□□ -1.87
CACUL1-202ENST00000477583 NCR1O76036 304 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 GASTP01350 101 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 CDK4P11802 303 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 VCAM1P19320 739 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 PDCP20941 246 aa3.36□□□□□ -1.87
CACUL1-202ENST00000477583 CRHR1P34998 444 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms