RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.54■□□□□ 0.4
VHL-203ENST00000477538 SLC4A7Q9Y6M7 1214 aa17.54■□□□□ 0.4
VHL-203ENST00000477538 PTPRJQ12913 1337 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 SMIM28A0A1B0GU29 152 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 PTGESO14684 152 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 INPPL1O15357 1258 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 PRKCSHP14314 528 aaPredicted RBP17.53■□□□□ 0.4
VHL-203ENST00000477538 KCNE1P15382 129 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 SCNN1GP51170 649 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 AFF1P51825 1210 aaKnown RBP17.53■□□□□ 0.4
VHL-203ENST00000477538 MAN2A1Q16706 1144 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 C1orf220Q5T0J3 134 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 LMBRD2Q68DH5 695 aaPredicted RBP17.53■□□□□ 0.4
VHL-203ENST00000477538 TMCO2Q7Z6W1 182 aaPredicted RBP17.53■□□□□ 0.4
VHL-203ENST00000477538 NT5DC4Q86YG4 428 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 GSTCDQ8NEC7 633 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 URGCPQ8TCY9 931 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 ZMAT2Q96NC0 199 aaKnown RBP17.53■□□□□ 0.4
VHL-203ENST00000477538 TSPAN18Q96SJ8 248 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 SLC9A7Q96T83 725 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 GDF15Q99988 308 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 UBE2OQ9C0C9 1292 aaKnown RBP17.53■□□□□ 0.4
VHL-203ENST00000477538 TAB2Q9NYJ8 693 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 DERAQ9Y315 318 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 C2CD2Q9Y426 696 aa17.53■□□□□ 0.4
VHL-203ENST00000477538 STX10O60499 249 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 THP07101 528 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 TPM2P07951 284 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 TMEM191BP0C7N4 346 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 GATMP50440 423 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 COPB1P53618 953 aaKnown RBP17.52■□□□□ 0.4
VHL-203ENST00000477538 CLDN10P78369 228 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 TFAMQ00059 246 aaKnown RBP17.52■□□□□ 0.4
VHL-203ENST00000477538 MLLT1Q03111 559 aaPredicted RBP17.52■□□□□ 0.4
VHL-203ENST00000477538 NOMO2Q5JPE7 1267 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 C9orf50Q5SZB4 431 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 RASIP1Q5U651 963 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 FAM117BQ6P1L5 589 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 RSPH1Q8WYR4 309 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 ANKRD36BP1Q96IX9 119 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 RNPC3Q96LT9 517 aaKnown RBP17.52■□□□□ 0.4
VHL-203ENST00000477538 CASD1Q96PB1 797 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 PPP1R10Q96QC0 940 aaKnown RBP17.52■□□□□ 0.4
VHL-203ENST00000477538 TMEM117Q9H0C3 514 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 MMRN2Q9H8L6 949 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 INTS13Q9NVM9 706 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 MIOSQ9NXC5 875 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 PLAGL2Q9UPG8 496 aa17.52■□□□□ 0.4
VHL-203ENST00000477538 TBKBP1A7MCY6 615 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 XPOTO43592 962 aaKnown RBP17.51■□□□□ 0.39
VHL-203ENST00000477538 DGKIO75912 1065 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 POMCP01189 267 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 TNNC2P02585 160 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 PPP3CAQ08209 521 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 KCNH2Q12809 1159 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 GRIK3Q13003 919 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 SHHQ15465 462 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 DUOXA2Q1HG44 320 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 MIIPQ5JXC2 388 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 OR5B17Q8NGF7 314 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 CACTINQ8WUQ7 758 aaKnown RBP17.51■□□□□ 0.39
VHL-203ENST00000477538 ZNF516Q92618 1163 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 FAM84AQ96KN4 292 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 MTMR12Q9C0I1 747 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 VPS16Q9H269 839 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 SLC38A7Q9NVC3 462 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 KANSL3Q9P2N6 904 aa17.51■□□□□ 0.39
VHL-203ENST00000477538 UBQLN1Q9UMX0 589 aaKnown RBP17.51■□□□□ 0.39
VHL-203ENST00000477538 LRRC10BA6NIK2 292 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 PES1O00541 588 aaKnown RBP17.5■□□□□ 0.39
VHL-203ENST00000477538 SERPINC1P01008 464 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 AFPP02771 609 aaKnown RBP17.5■□□□□ 0.39
VHL-203ENST00000477538 ATP2A2P16615 1042 aaKnown RBP17.5■□□□□ 0.39
VHL-203ENST00000477538 GTF2H1P32780 548 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 GCLMP48507 274 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 FMO5P49326 533 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 MXI1P50539 228 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 AP3M2P53677 418 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 FANCCQ00597 558 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 ZBTB6Q15916 424 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 VWA3BQ502W6 1294 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 PAN2Q504Q3 1202 aaKnown RBP17.5■□□□□ 0.39
VHL-203ENST00000477538 APTXQ7Z2E3 356 aaKnown RBP17.5■□□□□ 0.39
VHL-203ENST00000477538 BEST2Q8NFU1 509 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 PHOSPHO2Q8TCD6 241 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 C18orf25Q96B23 403 aaPredicted RBP17.5■□□□□ 0.39
VHL-203ENST00000477538 MRPL9Q9BYD2 267 aaKnown RBP17.5■□□□□ 0.39
VHL-203ENST00000477538 NDST4Q9H3R1 872 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 RC3H2Q9HBD1 1191 aaKnown RBP17.5■□□□□ 0.39
VHL-203ENST00000477538 TMEM8AQ9HCN3 771 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 TBC1D13Q9NVG8 400 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 TUBGCP4Q9UGJ1 667 aa17.5■□□□□ 0.39
VHL-203ENST00000477538 N4BP1O75113 896 aaKnown RBP17.49■□□□□ 0.39
VHL-203ENST00000477538 GJB5O95377 273 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 MYL7Q01449 175 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 RNASELQ05823 741 aaKnown RBP17.49■□□□□ 0.39
VHL-203ENST00000477538 SOX4Q06945 474 aaPredicted RBP17.49■□□□□ 0.39
VHL-203ENST00000477538 BIRC3Q13489 604 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 NAB2Q15742 525 aa17.49■□□□□ 0.39
VHL-203ENST00000477538 UVSSAQ2YD98 709 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms