RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 IGSF9Q9P2J2 1179 aa17.19■□□□□ 0.34
CLDN11-204ENST00000477531 ZMYND10O75800 440 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 HNRNPA1P09651 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLDN11-204ENST00000477531 PLCG1P19174 1290 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 FGFR3P22607 806 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 RPL9P32969 192 aaKnown RBP17.18■□□□□ 0.34
CLDN11-204ENST00000477531 ABCD1P33897 745 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 CACNB1Q02641 598 aaPredicted RBP17.18■□□□□ 0.34
CLDN11-204ENST00000477531 TDGQ13569 410 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 KARSQ15046 597 aaKnown RBP17.18■□□□□ 0.34
CLDN11-204ENST00000477531 ARSHQ5FYA8 562 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 PPM1LQ5SGD2 360 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 ANKS3Q6ZW76 656 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 FEZF2Q8TBJ5 459 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 REEP2Q9BRK0 252 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 BACH2Q9BYV9 841 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 ZHX3Q9H4I2 956 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 GOLGA2P5Q9HBQ8 144 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLDN11-204ENST00000477531 CNTN3Q9P232 1028 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 CCDC39Q9UFE4 941 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 FBXW11Q9UKB1 542 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 NUB1Q9Y5A7 615 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 GTF3C3Q9Y5Q9 886 aa17.18■□□□□ 0.34
CLDN11-204ENST00000477531 ZDBF2Q9HCK1 2354 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 MYH11P35749 1972 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 PODXLO00592 558 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 XYLBO75191 536 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 TBCAO75347 108 aaKnown RBP17.17■□□□□ 0.34
CLDN11-204ENST00000477531 OR1D2P34982 312 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 TXLNAP40222 546 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 LIG4P49917 911 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 PLXNA3P51805 1871 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 NCKAP1LP55160 1127 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 MCL1Q07820 350 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 RAB33AQ14088 237 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 MCM6Q14566 821 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 KYAT1Q16773 422 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 HAUS6Q7Z4H7 955 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 RAD54LQ92698 747 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 ZNF707Q96C28 371 aaPredicted RBP17.17■□□□□ 0.34
CLDN11-204ENST00000477531 INTS4Q96HW7 963 aaKnown RBP17.17■□□□□ 0.34
CLDN11-204ENST00000477531 CCSER1Q9C0I3 900 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 MFSD1Q9H3U5 465 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 KCNK12Q9HB15 430 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 MTRRQ9UBK8 725 aa17.17■□□□□ 0.34
CLDN11-204ENST00000477531 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.17■□□□□ 0.34
CLDN11-204ENST00000477531 MTCL1Q9Y4B5 1905 aaKnown RBP17.16■□□□□ 0.34
CLDN11-204ENST00000477531 K7ENM7 598 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 ABLIM1O14639 778 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 PAPLNO95428 1278 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 C8AP07357 584 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 CLTAP09496 248 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 SYT1P21579 422 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 TKTP29401 623 aaKnown RBP17.16■□□□□ 0.34
CLDN11-204ENST00000477531 AVPR2P30518 371 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 DDIT3P35638 169 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 PTPN5P54829 565 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 UVSSAQ2YD98 709 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 AXDND1Q5T1B0 1012 aaPredicted RBP17.16■□□□□ 0.34
CLDN11-204ENST00000477531 RTL10Q7L3V2 364 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 GET4Q7L5D6 327 aaPredicted RBP17.16■□□□□ 0.34
CLDN11-204ENST00000477531 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
CLDN11-204ENST00000477531 LARP4BQ92615 738 aaKnown RBP17.16■□□□□ 0.34
CLDN11-204ENST00000477531 NXPE3Q969Y0 559 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 ZMAT2Q96NC0 199 aaKnown RBP17.16■□□□□ 0.34
CLDN11-204ENST00000477531 PLEKHA5Q9HAU0 1116 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 BLOC1S4Q9NUP1 217 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 POLIQ9UNA4 740 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 BACE2Q9Y5Z0 518 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 CLIC4Q9Y696 253 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 ZNF318Q5VUA4 2279 aa17.16■□□□□ 0.34
CLDN11-204ENST00000477531 H7C4K7 107 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 I3L4J1 428 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 HNRNPDLO14979 420 aaKnown RBP17.15■□□□□ 0.34
CLDN11-204ENST00000477531 SYN3O14994 580 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 TRAK2O60296 914 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 MARCKSP29966 332 aaPredicted RBP17.15■□□□□ 0.34
CLDN11-204ENST00000477531 HOXA9P31269 272 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 BRCC3P46736 316 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 GRIN1Q05586 938 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 SOX4Q06945 474 aaPredicted RBP17.15■□□□□ 0.34
CLDN11-204ENST00000477531 SLC10A6Q3KNW5 377 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 KCNN1Q92952 543 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 EPS15L1Q9UBC2 864 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 FBXL21Q9UKT6 434 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 TBX20Q9UMR3 447 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 CDY1Q9Y6F8 540 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 ZFP37Q9Y6Q3 630 aaPredicted RBP17.15■□□□□ 0.34
CLDN11-204ENST00000477531 TRIP11Q15643 1979 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 C2orf16Q68DN1 1984 aa17.15■□□□□ 0.34
CLDN11-204ENST00000477531 DENND4AQ7Z401 1863 aa17.14■□□□□ 0.33
CLDN11-204ENST00000477531 CCL16O15467 120 aa17.14■□□□□ 0.33
CLDN11-204ENST00000477531 ADAM12O43184 909 aa17.14■□□□□ 0.33
CLDN11-204ENST00000477531 XPOTO43592 962 aaKnown RBP17.14■□□□□ 0.33
CLDN11-204ENST00000477531 FSHRP23945 695 aa17.14■□□□□ 0.33
CLDN11-204ENST00000477531 HOXD11P31277 338 aaPredicted RBP17.14■□□□□ 0.33
CLDN11-204ENST00000477531 ELF1P32519 619 aa17.14■□□□□ 0.33
CLDN11-204ENST00000477531 MCM4P33991 863 aa17.14■□□□□ 0.33
CLDN11-204ENST00000477531 ZNF131P52739 623 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms