RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 TRIM66O15016 1216 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 FANCGO15287 622 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 OGTO15294 1046 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ST8SIA5O15466 376 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 CLDN3O15551 220 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ATP8B1O43520 1251 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ZEB2O60315 1214 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 MSCO60682 206 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 KPNA6O60684 536 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 IL18RAPO95256 599 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ALDH1A1P00352 501 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 AVPP01185 164 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 LGALS2P05162 132 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ADRB2P07550 413 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 PLEKP08567 350 aaPredicted RBP7.19□□□□□ -1.26
LDB3-206ENST00000477489 H2AFZP0C0S5 128 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 TMEM253P0C7T8 217 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 FAM228BP0C875 321 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 CTAGE8P0CG41 777 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 TRIM49P0CI25 452 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 TRIM49CP0CI26 452 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ACTN1P12814 892 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 NDUFV2P19404 249 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 PROZP22891 400 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 RGS2P41220 211 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 PHKA2P46019 1235 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 GCLMP48507 274 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 PTENP60484 403 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 CYP27A1Q02318 531 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 GFPT1Q06210 699 aaPredicted RBP7.19□□□□□ -1.26
LDB3-206ENST00000477489 MCL1Q07820 350 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 LAMTOR4Q0VGL1 99 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ACVR2BQ13705 512 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 DGKDQ16760 1214 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ZACNQ401N2 412 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 WDR44Q5JSH3 913 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 H2AFVQ71UI9 128 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 RSRC2Q7L4I2 434 aaKnown RBP7.19□□□□□ -1.26
LDB3-206ENST00000477489 ZNF572Q7Z3I7 529 aaPredicted RBP7.19□□□□□ -1.26
LDB3-206ENST00000477489 ZNF571Q7Z3V5 609 aaPredicted RBP7.19□□□□□ -1.26
LDB3-206ENST00000477489 CTAGE6Q86UF2 777 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ZNF410Q86VK4 478 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 NT5DC4Q86YG4 428 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 WDR49Q8IV35 697 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 BRSK2Q8IWQ3 736 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 CTAGE4Q8IX94 777 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 RHOT2Q8IXI1 618 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 PARP9Q8IXQ6 854 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 FAM71AQ8IYT1 594 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 LINC01465Q8N7H1 131 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 PRPF31Q8WWY3 499 aaKnown RBP7.19□□□□□ -1.26
LDB3-206ENST00000477489 SHC3Q92529 594 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 TMEM143Q96AN5 459 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 TSPAN18Q96SJ8 248 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 CGRRF1Q99675 332 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.19□□□□□ -1.26
LDB3-206ENST00000477489 MSTO1Q9BUK6 570 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 LACRTQ9GZZ8 138 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 PCIF1Q9H4Z3 704 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 ZFYVE28Q9HCC9 887 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 POLD4Q9HCU8 107 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 AAASQ9NRG9 546 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 RAB20Q9NX57 234 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 SUCLA2Q9P2R7 463 aaPredicted RBP7.19□□□□□ -1.26
LDB3-206ENST00000477489 ADAMTS1Q9UHI8 967 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 LCMT1Q9UIC8 334 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 TNFSF13BQ9Y275 285 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 HYOU1Q9Y4L1 999 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 TLL2Q9Y6L7 1015 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 NCANO14594 1321 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 MYH10P35580 1976 aa7.19□□□□□ -1.26
LDB3-206ENST00000477489 GRID2IPA4D2P6 1211 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 ANKRD62A6NC57 917 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 MOXD2PA6NHM9 499 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 A6NJR5 290 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 C22orf31O95567 290 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 SNAI1O95863 264 aaPredicted RBP7.18□□□□□ -1.26
LDB3-206ENST00000477489 PRKCBP05771 671 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 MMP3P08254 477 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 MCF2P10911 925 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 TNFAIP3P21580 790 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 CHMP4BP1P59074 171 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 DLG4P78352 724 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 TAF1CQ15572 869 aaPredicted RBP7.18□□□□□ -1.26
LDB3-206ENST00000477489 KIAA0753Q2KHM9 967 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 CST9Q5W186 159 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 PHLDB3Q6NSJ2 640 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 CCDC70Q6NSX1 233 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 MPZL3Q6UWV2 235 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 C17orf99Q6UX52 265 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 TRIM72Q6ZMU5 477 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 SV2AQ7L0J3 742 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 EEPD1Q7L9B9 569 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 SAPCD2Q86UD0 394 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 CD302Q8IX05 232 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 CRIPAKQ8N1N5 446 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 TTC39CQ8N584 583 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 RNF149Q8NC42 400 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 HELQQ8TDG4 1101 aa7.18□□□□□ -1.26
LDB3-206ENST00000477489 CTNNBL1Q8WYA6 563 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms