RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MTMR14Q8NCE2 650 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 GRK7Q8WTQ7 553 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 VCX3BQ9H321 246 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 VCX3AQ9NNX9 186 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 COG5Q9UP83 839 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
CLSTN1-205ENST00000477264 CLRN2A0PK11 232 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 PRPF4O43172 522 aaKnown RBP eCLIP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 THAP12O43422 761 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 SORBS3O60504 671 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 ABHD2P08910 425 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 PTK6Q13882 451 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 SPARCL1Q14515 664 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 TBC1D25Q3MII6 688 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 SLC45A4Q5BKX6 768 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 MAEAQ7L5Y9 396 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 RELL1Q8IUW5 271 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 BBOF1Q8ND07 529 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 PPFIBP2Q8ND30 876 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 SLC17A8Q8NDX2 589 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 EPAS1Q99814 870 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 DENND2DQ9H6A0 471 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 SENP1Q9P0U3 644 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 PHTF1Q9UMS5 762 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 DDTLA6NHG4 134 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 TCP10L2B9ZVM9 353 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 FZD9O00144 591 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 ZWINTO95229 277 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 EPHB2P29323 1055 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 FOXN2P32314 431 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 CLK2P49760 499 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 SIX1Q15475 284 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 KCTD19Q17RG1 926 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 GJB7Q6PEY0 223 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 RNF207Q6ZRF8 634 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 C10orf82Q8WW14 230 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 KRT35Q92764 455 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 CD101Q93033 1021 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 RBM41Q96IZ5 413 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 NR1H4Q96RI1 486 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 FOXP3Q9BZS1 431 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 PIDD1Q9HB75 910 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 MLXIPLQ9NP71 852 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 MYOZ2Q9NPC6 264 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 ZNF70Q9UC06 446 aaPredicted RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 SMG5Q9UPR3 1016 aaKnown RBP16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 GJA3Q9Y6H8 435 aa16.24■□□□□ 0.19
CLSTN1-205ENST00000477264 NPHP3-ACAD11A0A0J9YXS1 232 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 POTEB3A0JP26 581 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 POTECB2RU33 542 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 EIF3DO15371 548 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 EDF1O60869 148 aaKnown RBP16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 ASMTLO95671 621 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 PSMC2P35998 433 aaKnown RBP16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 NOVP48745 357 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 CASP5P51878 434 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 GPC5P78333 572 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 CDR2Q01850 454 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 KRT17Q04695 432 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 GIT2Q14161 759 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 RCN2Q14257 317 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 USP17L2Q6R6M4 530 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 POTEBQ6S5H4 581 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 SFR1Q86XK3 245 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 SRRM1Q8IYB3 904 aaKnown RBP16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 BORCS6Q96GS4 357 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 ZHX3Q9H4I2 956 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 EURLQ9NYK6 297 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 UBE4BO95155 1302 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 EIF4E1BA6NMX2 242 aaKnown RBP16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 T-ENOLP0DO92 83 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 SHMT1P34896 483 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 FMO5P49326 533 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 PDK4Q16654 411 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 ARSHQ5FYA8 562 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 C4orf50Q6ZRC1 276 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 FAM186BQ8IYM0 893 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 ATL2Q8NHH9 583 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 ERMNQ8TAM6 284 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 CEP95Q96GE4 821 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 CCDC17Q96LX7 622 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 GBP5Q96PP8 586 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 AGPAT1Q99943 283 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 SYT17Q9BSW7 474 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 TRAIPQ9BWF2 469 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 CPVLQ9H3G5 476 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 NINJ2Q9NZG7 142 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 APEX2Q9UBZ4 518 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 ASIC3Q9UHC3 531 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 ATRNL1Q5VV63 1379 aa16.23■□□□□ 0.19
CLSTN1-205ENST00000477264 MAP3K13O43283 966 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 TJP3O95049 919 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 GAS8O95995 478 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 HOXD13P35453 343 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 PRELPP51888 382 aa16.22■□□□□ 0.19
CLSTN1-205ENST00000477264 POLE2P56282 527 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms