RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 LILRA6Q6PI73 481 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 CCDC73Q6ZRK6 1079 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 TAS1R3Q7RTX0 852 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 TMEM161BQ8NDZ6 487 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 PIK3R5Q8WYR1 880 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 RABGGTAQ92696 567 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 STAMQ92783 540 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 NTPCRQ9BSD7 190 aaKnown RBP17.73■□□□□ 0.43
COL1A1-205ENST00000476387 TCHPQ9BT92 498 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 TTPALQ9BTX7 342 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 TARS2Q9BW92 718 aaKnown RBP17.73■□□□□ 0.43
COL1A1-205ENST00000476387 ZHX3Q9H4I2 956 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 PARVGQ9HBI0 331 aa17.73■□□□□ 0.43
COL1A1-205ENST00000476387 K7ENM7 598 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 SPTLC2O15270 562 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 YEATS4O95619 227 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 MAPTP10636 758 aaKnown RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 AVPR2P30518 371 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 DDIT3P35638 169 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 YARSP54577 528 aaKnown RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 VCPP55072 806 aaKnown RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 RTP2Q5QGT7 225 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 MPZL3Q6UWV2 235 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 ALYREFQ86V81 257 aaKnown RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 PALB2Q86YC2 1186 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 MYCT1Q8N699 235 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 LINC00301Q8NCQ3 95 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 SMG7Q92540 1137 aaKnown RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 ZNF707Q96C28 371 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 BICD1Q96G01 975 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 CCDC94Q9BW85 323 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 CDT1Q9H211 546 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 TOPORSQ9NS56 1045 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 ANKFY1Q9P2R3 1169 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 CACNG4Q9UBN1 327 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 MTCL1Q9Y4B5 1905 aaKnown RBP17.72■□□□□ 0.43
COL1A1-205ENST00000476387 CLUHO75153 1309 aa17.72■□□□□ 0.43
COL1A1-205ENST00000476387 TMEM189-UBE2V1I3L0A0 370 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 RFPL2O75678 378 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 MCF2P10911 925 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 HARSP12081 509 aaKnown RBP17.71■□□□□ 0.43
COL1A1-205ENST00000476387 SCP2P22307 547 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 STAT6P42226 847 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 NCKAP1LP55160 1127 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 FOXD4L6Q3SYB3 417 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-205ENST00000476387 FAM171A1Q5VUB5 890 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 FOXD4L3Q6VB84 417 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-205ENST00000476387 HASPINQ8TF76 798 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 UROC1Q96N76 676 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 PPP1R10Q96QC0 940 aaKnown RBP17.71■□□□□ 0.43
COL1A1-205ENST00000476387 PRKD2Q9BZL6 878 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 CXCL16Q9H2A7 254 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 PTPRHQ9HD43 1115 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 IGSF9Q9P2J2 1179 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 EPS15L1Q9UBC2 864 aa17.71■□□□□ 0.43
COL1A1-205ENST00000476387 PPP6R2O75170 966 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 TOM1L1O75674 476 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 ZMYND10O75800 440 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 PDGFBP01127 241 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-205ENST00000476387 SPATA31D3P0C874 917 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 RPL17P18621 184 aaKnown RBP17.7■□□□□ 0.42
COL1A1-205ENST00000476387 GRM5P41594 1212 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 MATR3P43243 847 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL1A1-205ENST00000476387 MRE11P49959 708 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 ZNF131P52739 623 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 TCF15Q12870 199 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 TDGQ13569 410 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL1A1-205ENST00000476387 PSMD5Q16401 504 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 PRSS55Q6UWB4 352 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-205ENST00000476387 ZPBP2Q6X784 338 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-205ENST00000476387 SPATA31D4Q6ZUB0 917 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 SV2BQ7L1I2 683 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 HAUS6Q7Z4H7 955 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 LNX1Q8TBB1 728 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-205ENST00000476387 CLSTN3Q9BQT9 956 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 IRF2BPLQ9H1B7 796 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 SMOC2Q9H3U7 446 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 KCNK12Q9HB15 430 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 FBXW11Q9UKB1 542 aa17.7■□□□□ 0.42
COL1A1-205ENST00000476387 TRAK2O60296 914 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 N4BP1O75113 896 aaKnown RBP17.69■□□□□ 0.42
COL1A1-205ENST00000476387 PROZP22891 400 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 ABCD1P33897 745 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 OSTNP61366 133 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 XKR4Q5GH76 650 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 ATL3Q6DD88 541 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 DCLRE1AQ6PJP8 1040 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 CEP57Q86XR8 500 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 GLYCTKQ8IVS8 523 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 CEP120Q8N960 986 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 KCNG4Q8TDN1 519 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 NXPE3Q969Y0 559 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 PIDD1Q9HB75 910 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.69■□□□□ 0.42
COL1A1-205ENST00000476387 DUSP12Q9UNI6 340 aa17.69■□□□□ 0.42
COL1A1-205ENST00000476387 TCHHQ07283 1943 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms