RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SMIM10L2BP0DMW5 78 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 IL9P15248 144 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 CRYBB1P53674 252 aaPredicted RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 PMS1P54277 932 aaKnown RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 PTK7Q13308 1070 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 ZC2HC1CQ53FD0 456 aaPredicted RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 C6orf132Q5T0Z8 1188 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 TSHZ1Q6ZSZ6 1077 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 TMCO2Q7Z6W1 182 aaPredicted RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 IRF2BP1Q8IU81 584 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 RHPN2Q8IUC4 686 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 CNGA4Q8IV77 575 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 VSTM4Q8IW00 320 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 CD302Q8IX05 232 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 FAM186BQ8IYM0 893 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 KIAA0319LQ8IZA0 1049 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 RNF149Q8NC42 400 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 CCDC150Q8NCX0 1101 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 POMGNT1Q8WZA1 660 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 DHX38Q92620 1227 aaKnown RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 HPS3Q969F9 1004 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 MRPL38Q96DV4 380 aaKnown RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 FBXL18Q96ME1 805 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 NAP1L5Q96NT1 182 aaPredicted RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 ERGIC2Q96RQ1 377 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 TCHPQ9BT92 498 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 NAA15Q9BXJ9 866 aaKnown RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 HSD3B7Q9H2F3 369 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 CHST12Q9NRB3 414 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 ZNHIT6Q9NWK9 470 aaKnown RBP7.63□□□□□ -1.19
SHQ1-207ENST00000475558 PRKAG3Q9UGI9 489 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 GTF2IRD1Q9UHL9 959 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 AKT3Q9Y243 479 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 SIP14410 1827 aa7.63□□□□□ -1.19
SHQ1-207ENST00000475558 A0A1W2PQJ5 194 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 TRIM49BA6NDI0 452 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 PES1O00541 588 aaKnown RBP7.62□□□□□ -1.19
SHQ1-207ENST00000475558 CCP110O43303 1012 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 NCK2O43639 380 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 AFPP02771 609 aaKnown RBP7.62□□□□□ -1.19
SHQ1-207ENST00000475558 AMHP03971 560 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 ATP1A3P13637 1013 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 RFX1P22670 979 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 EIF4BP23588 611 aaKnown RBP7.62□□□□□ -1.19
SHQ1-207ENST00000475558 HOXC8P31273 242 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 HOXD13P35453 343 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 CASP5P51878 434 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 IGBP1P78318 339 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 ADAM17P78536 824 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 NHLH1Q02575 133 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 PRPF4BQ13523 1007 aaKnown RBP7.62□□□□□ -1.19
SHQ1-207ENST00000475558 TIGD5Q53EQ6 642 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 CEP135Q66GS9 1140 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 FAM117BQ6P1L5 589 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 LRRC55Q6ZSA7 311 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 NT5DC4Q86YG4 428 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 TRIM59Q8IWR1 403 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 GPD1LQ8N335 351 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 LINC01465Q8N7H1 131 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 KAT2BQ92831 832 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 PABPC5Q96DU9 382 aaKnown RBP7.62□□□□□ -1.19
SHQ1-207ENST00000475558 FAXDC2Q96IV6 333 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 MFSD14AQ96MC6 490 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 EPAS1Q99814 870 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 ADPGKQ9BRR6 497 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 C17orf80Q9BSJ5 609 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 VPS16Q9H269 839 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 GPRC5CQ9NQ84 441 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 SETD4Q9NVD3 440 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 HSPBP1Q9NZL4 362 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 HDAC6Q9UBN7 1215 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 FBXL5Q9UKA1 691 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 AGO2Q9UKV8 859 aaKnown RBP7.62□□□□□ -1.19
SHQ1-207ENST00000475558 MYO6Q9UM54 1294 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 TNFSF13BQ9Y275 285 aa7.62□□□□□ -1.19
SHQ1-207ENST00000475558 LUC7L2Q9Y383 392 aaKnown RBP7.62□□□□□ -1.19
SHQ1-207ENST00000475558 A0A0B4J269 797 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 A0A1B0GUA9 196 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 TMEM150BA6NC51 233 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 AKR1B15C9JRZ8 316 aaPredicted RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 INO80B-WBP1J3KQ70 363 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 GPR182O15218 404 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 CLIC2O15247 247 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 ERLIN2O94905 339 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 IL18RAPO95256 599 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 TUBB4AP04350 444 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 PRKCBP05771 671 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 MCF2P10911 925 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 SKIP12755 728 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 MATR3P43243 847 aaKnown RBP eCLIP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 VAMP7P51809 220 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 NLRP11P59045 1033 aaKnown RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 HTRA4P83105 476 aaPredicted RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 MCL1Q07820 350 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 KCNH2Q12809 1159 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 CAPSQ13938 189 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 TCTN1Q2MV58 587 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 TRIM71Q2Q1W2 868 aaKnown RBP7.61□□□□□ -1.19
SHQ1-207ENST00000475558 EPC2Q52LR7 807 aa7.61□□□□□ -1.19
SHQ1-207ENST00000475558 MARCH8Q5T0T0 291 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms