RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 KCNN1Q92952 543 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 TCHPQ9BT92 498 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 PTPRHQ9HD43 1115 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 FBXO2Q9UK22 296 aaPredicted RBP12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 ADAM28Q9UKQ2 775 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 GDAQ9Y2T3 454 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 TTC28Q96AY4 2481 aa12.59□□□□□ -0.39
HLA-DOB-208ENST00000475235 PTGESO14684 152 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 LILRB3O75022 631 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 TADA2AO75478 443 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 TOM1L1O75674 476 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 EFEMP2O95967 443 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 MAPTP10636 758 aaKnown RBP12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 KLRC2P26717 231 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 MARCKSP29966 332 aaPredicted RBP12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 DDIT3P35638 169 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 CBX2Q14781 532 aaPredicted RBP12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 ARSHQ5FYA8 562 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 FUT10Q6P4F1 479 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 FAM173BQ6P4H8 233 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 SYCE2Q6PIF2 218 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 ELMSAN1Q6PJG2 1045 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 MPZL3Q6UWV2 235 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 ZPBP2Q6X784 338 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 TAS1R3Q7RTX0 852 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 LARP4BQ92615 738 aaKnown RBP12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 NECTIN4Q96NY8 510 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 KLHL5Q96PQ7 755 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 TARS2Q9BW92 718 aaKnown RBP12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 PHF7Q9BWX1 381 aaPredicted RBP12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 CDT1Q9H211 546 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 S1PR5Q9H228 398 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 PARVGQ9HBI0 331 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 BLOC1S4Q9NUP1 217 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 CALCOCO1Q9P1Z2 691 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 STK17AQ9UEE5 414 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 DPP7Q9UHL4 492 aa12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 SF3B1O75533 1304 aaKnown RBP eCLIP12.58□□□□□ -0.4
HLA-DOB-208ENST00000475235 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 TBCAO75347 108 aaKnown RBP12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 FAM13AO94988 1023 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 ADH1AP07327 375 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 CNPP09543 421 aaKnown RBP12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 PROZP22891 400 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 ZNF131P52739 623 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 NCKAP1LP55160 1127 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 DSG1Q02413 1049 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 CREMQ03060 361 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 CEBPZQ03701 1054 aaKnown RBP12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 ELAVL2Q12926 359 aaKnown RBP12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 DHX8Q14562 1220 aaKnown RBP12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 SLC39A14Q15043 492 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 USP41Q3LFD5 358 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 SLC22A17Q8WUG5 538 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 UROC1Q96N76 676 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 ZNF396Q96N95 335 aaPredicted RBP12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 USP28Q96RU2 1077 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 ADAM7Q9H2U9 754 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 CHST7Q9NS84 486 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 ATG2AQ2TAZ0 1938 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 NPHP3-ACAD11A0A0J9YXS1 232 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 CASTOR2A6NHX0 329 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 C2CD2LO14523 706 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 C1RP00736 705 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 EPCAMP16422 314 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 NASPP49321 788 aaPredicted RBP12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 MCM6Q14566 821 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 KIAA0319Q5VV43 1072 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 HAUS6Q7Z4H7 955 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 ZBTB33Q86T24 672 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 MYCT1Q8N699 235 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 KRI1Q8N9T8 703 aaKnown RBP12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 EPSTI1Q96J88 318 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 FBXL18Q96ME1 805 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 RIPOR3Q96MK2 946 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 ACAP3Q96P50 834 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 EPHX3Q9H6B9 360 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 SFXN1Q9H9B4 322 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 SLC38A7Q9NVC3 462 aa12.57□□□□□ -0.4
HLA-DOB-208ENST00000475235 LOC730098B7Z3J9 87 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 F8W810 466 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 K7ENM7 598 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 CLDN3O15551 220 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 DCXO43602 365 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 TRAK2O60296 914 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 MTHFRP42898 656 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 CLCN4P51793 760 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 STK38Q15208 465 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 NAB2Q15742 525 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 XKR4Q5GH76 650 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 RRAGBQ5VZM2 374 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 CCDC73Q6ZRK6 1079 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 TAS1R1Q7RTX1 841 aa12.56□□□□□ -0.4
HLA-DOB-208ENST00000475235 LRRC15Q8TF66 581 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms