RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 TNFSF9P41273 254 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 PURAQ00577 322 aaKnown RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 POU5F1Q01860 360 aaKnown RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 TUBB2AQ13885 445 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 PCBP1Q15365 356 aaKnown RBP eCLIP11.01□□□□□ -0.65
PCCB-213ENST00000475214 SEZ6Q53EL9 994 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 ZBTB41Q5SVQ8 909 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 MAP3K21Q5TCX8 1036 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 LMBRD2Q68DH5 695 aaPredicted RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 THNSL1Q8IYQ7 743 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 ZNF710Q8N1W2 664 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 C7orf31Q8N865 590 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 TRPV1Q8NER1 839 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 NAPGQ99747 312 aaPredicted RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 ADPGKQ9BRR6 497 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 MTG1Q9BT17 334 aaPredicted RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 TUBB2BQ9BVA1 445 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 IRX2Q9BZI1 471 aaPredicted RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 GPR88Q9GZN0 384 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 LACRTQ9GZZ8 138 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 FAM49AQ9H0Q0 323 aaPredicted RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 UPF3AQ9H1J1 476 aaKnown RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 CDT1Q9H211 546 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 RPF1Q9H9Y2 349 aaKnown RBP11.01□□□□□ -0.65
PCCB-213ENST00000475214 C1orf112Q9NSG2 853 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 TRIM10Q9UDY6 481 aa11.01□□□□□ -0.65
PCCB-213ENST00000475214 RCCD1A6NED2 376 aa11□□□□□ -0.65
PCCB-213ENST00000475214 SEPT4O43236 478 aa11□□□□□ -0.65
PCCB-213ENST00000475214 FAM189A1O60320 539 aa11□□□□□ -0.65
PCCB-213ENST00000475214 LRRN2O75325 713 aa11□□□□□ -0.65
PCCB-213ENST00000475214 SLU7O95391 586 aaKnown RBP11□□□□□ -0.65
PCCB-213ENST00000475214 ABL1P00519 1130 aa11□□□□□ -0.65
PCCB-213ENST00000475214 CLTAP09496 248 aa11□□□□□ -0.65
PCCB-213ENST00000475214 IQCF3P0C7M6 154 aa11□□□□□ -0.65
PCCB-213ENST00000475214 PNMA6AP0CW24 399 aaPredicted RBP11□□□□□ -0.65
PCCB-213ENST00000475214 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
PCCB-213ENST00000475214 USP8P40818 1118 aa11□□□□□ -0.65
PCCB-213ENST00000475214 IRX5P78411 483 aaPredicted RBP11□□□□□ -0.65
PCCB-213ENST00000475214 GCNT1Q02742 428 aa11□□□□□ -0.65
PCCB-213ENST00000475214 NAB2Q15742 525 aa11□□□□□ -0.65
PCCB-213ENST00000475214 AMHR2Q16671 573 aa11□□□□□ -0.65
PCCB-213ENST00000475214 DUOXA2Q1HG44 320 aa11□□□□□ -0.65
PCCB-213ENST00000475214 KIZQ2M2Z5 673 aa11□□□□□ -0.65
PCCB-213ENST00000475214 GNASQ5JWF2 1037 aa11□□□□□ -0.65
PCCB-213ENST00000475214 TDRD10Q5VZ19 366 aaKnown RBP11□□□□□ -0.65
PCCB-213ENST00000475214 EEF1DP3Q658K8 133 aa11□□□□□ -0.65
PCCB-213ENST00000475214 ALKBH5Q6P6C2 394 aaKnown RBP11□□□□□ -0.65
PCCB-213ENST00000475214 NME8Q8N427 588 aa11□□□□□ -0.65
PCCB-213ENST00000475214 RNF10Q8N5U6 811 aaKnown RBP11□□□□□ -0.65
PCCB-213ENST00000475214 HELQQ8TDG4 1101 aa11□□□□□ -0.65
PCCB-213ENST00000475214 ANKRD36BP1Q96IX9 119 aa11□□□□□ -0.65
PCCB-213ENST00000475214 PAWRQ96IZ0 340 aaKnown RBP11□□□□□ -0.65
PCCB-213ENST00000475214 ALS2CR12Q96Q35 445 aa11□□□□□ -0.65
PCCB-213ENST00000475214 IMPG2Q9BZV3 1241 aa11□□□□□ -0.65
PCCB-213ENST00000475214 PDZD7Q9H5P4 517 aa11□□□□□ -0.65
PCCB-213ENST00000475214 L2HGDHQ9H9P8 463 aa11□□□□□ -0.65
PCCB-213ENST00000475214 OGDHLQ9ULD0 1010 aa11□□□□□ -0.65
PCCB-213ENST00000475214 TFR2Q9UP52 801 aa11□□□□□ -0.65
PCCB-213ENST00000475214 ATP8B3O60423 1300 aa11□□□□□ -0.65
PCCB-213ENST00000475214 A0A1W2PPC1 479 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 MACROD2A1Z1Q3 448 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 B4GALT4O60513 344 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 TSPAN1O60635 241 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 CSDE1O75534 798 aaKnown RBP10.99□□□□□ -0.65
PCCB-213ENST00000475214 CLSTN1O94985 981 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 TNNC2P02585 160 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 TMEM191BP0C7N4 346 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 ARF4P18085 180 aaPredicted RBP10.99□□□□□ -0.65
PCCB-213ENST00000475214 TBXAS1P24557 533 aaPredicted RBP10.99□□□□□ -0.65
PCCB-213ENST00000475214 GTF2F1P35269 517 aaKnown RBP eCLIP10.99□□□□□ -0.65
PCCB-213ENST00000475214 NAP1L1P55209 391 aaKnown RBP10.99□□□□□ -0.65
PCCB-213ENST00000475214 WNT7BP56706 349 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 OSTNP61366 133 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 NKX3-2P78367 333 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 ADAM17P78536 824 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 CACNB2Q08289 660 aaPredicted RBP10.99□□□□□ -0.65
PCCB-213ENST00000475214 FAM71AQ8IYT1 594 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 TRIM58Q8NG06 486 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 DNAJB3Q8WWF6 145 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 SHC3Q92529 594 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 TATDN2Q93075 761 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 CPB2Q96IY4 423 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 KREMEN1Q96MU8 473 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 NOX5Q96PH1 765 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 AGPAT1Q99943 283 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 PI4K2AQ9BTU6 479 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 ADAMTS10Q9H324 1103 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.99□□□□□ -0.652e-23■■■■■ 142.5
PCCB-213ENST00000475214 NAGPAQ9UK23 515 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 INTUQ9ULD6 942 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 GINS2Q9Y248 185 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 PTPRJQ12913 1337 aa10.99□□□□□ -0.65
PCCB-213ENST00000475214 A0A1B0GUA9 196 aa10.98□□□□□ -0.65
PCCB-213ENST00000475214 MYADML2A6NDP7 307 aa10.98□□□□□ -0.65
PCCB-213ENST00000475214 BTNL10A8MVZ5 291 aa10.98□□□□□ -0.65
PCCB-213ENST00000475214 DDX3XO00571 662 aaKnown RBP eCLIP10.98□□□□□ -0.65
PCCB-213ENST00000475214 TREHO43280 583 aa10.98□□□□□ -0.65
PCCB-213ENST00000475214 GPR32O75388 356 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms