RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 KIAA0319Q5VV43 1072 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 ELMSAN1Q6PJG2 1045 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 THSD4Q6ZMP0 1018 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 TAS1R3Q7RTX0 852 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 PALB2Q86YC2 1186 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 RNF168Q8IYW5 571 aaPredicted RBP10.33□□□□□ -0.76
PDPN-204ENST00000475043 SPIRE2Q8WWL2 714 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 BICD1Q96G01 975 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 REEP2Q9BRK0 252 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 NTPCRQ9BSD7 190 aaKnown RBP10.33□□□□□ -0.76
PDPN-204ENST00000475043 SFXN1Q9H9B4 322 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 MAN1C1Q9NR34 630 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 CHST7Q9NS84 486 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 ANKFY1Q9P2R3 1169 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 DAXXQ9UER7 740 aaPredicted RBP10.33□□□□□ -0.76
PDPN-204ENST00000475043 RABGEF1Q9UJ41 708 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 ODF2LQ9ULJ1 636 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 NR2E1Q9Y466 385 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 CITO14578 2027 aa10.33□□□□□ -0.76
PDPN-204ENST00000475043 C2orf16Q68DN1 1984 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 PRR33A8MZF0 331 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 H0YCG3 227 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 STX6O43752 255 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 B3GAT3O94766 335 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 FAM13AO94988 1023 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 EFEMP2O95967 443 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 GLUD1P00367 558 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 HSP90AA1P07900 732 aaKnown RBP10.32□□□□□ -0.76
PDPN-204ENST00000475043 SPATA31D3P0C874 917 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 MAPTP10636 758 aaKnown RBP10.32□□□□□ -0.76
PDPN-204ENST00000475043 MCF2P10911 925 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 RPL17P18621 184 aaKnown RBP10.32□□□□□ -0.76
PDPN-204ENST00000475043 TXLNAP40222 546 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 PTPN5P54829 565 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 PROX2Q3B8N5 592 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 HERC4Q5GLZ8 1057 aaPredicted RBP10.32□□□□□ -0.76
PDPN-204ENST00000475043 PRSS55Q6UWB4 352 aaPredicted RBP10.32□□□□□ -0.76
PDPN-204ENST00000475043 MPZL3Q6UWV2 235 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 SPATA31D4Q6ZUB0 917 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 MYCT1Q8N699 235 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 TMEM161BQ8NDZ6 487 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 RAD54LQ92698 747 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 EPSTI1Q96J88 318 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 ZBTB45Q96K62 511 aaPredicted RBP10.32□□□□□ -0.76
PDPN-204ENST00000475043 ACAP3Q96P50 834 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 CCSER1Q9C0I3 900 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 GOLGA2P5Q9HBQ8 144 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 PTPRHQ9HD43 1115 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDPN-204ENST00000475043 BLOC1S4Q9NUP1 217 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 CCDC39Q9UFE4 941 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 DPP7Q9UHL4 492 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 HCN4Q9Y3Q4 1203 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 NCOR1O75376 2440 aa10.32□□□□□ -0.76
PDPN-204ENST00000475043 MTCL1Q9Y4B5 1905 aaKnown RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 SMIM28A0A1B0GU29 152 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 K7ENM7 598 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 CLDN3O15551 220 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 TBCAO75347 108 aaKnown RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 TOM1L1O75674 476 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 DDIT3P35638 169 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 LIG4P49917 911 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 CLCNKBP51801 687 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 NCKAP1LP55160 1127 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 CREMQ03060 361 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 ELAVL2Q12926 359 aaKnown RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 NOLC1Q14978 699 aaKnown RBP eCLIP10.31□□□□□ -0.76
PDPN-204ENST00000475043 PTPAQ15257 358 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 NAB2Q15742 525 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 SEZ6Q53EL9 994 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 RTP2Q5QGT7 225 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 C6orf132Q5T0Z8 1188 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 USP49Q70CQ1 688 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 HAUS6Q7Z4H7 955 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 GPR149Q86SP6 731 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 HSCBQ8IWL3 235 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 FEZF2Q8TBJ5 459 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 LRRC15Q8TF66 581 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 LARP4BQ92615 738 aaKnown RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 EDAQ92838 391 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 WNT2BQ93097 391 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 UROC1Q96N76 676 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 CLIC6Q96NY7 704 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 PPP1R10Q96QC0 940 aaKnown RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 TTPALQ9BTX7 342 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 ZSCAN16Q9H4T2 348 aaPredicted RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 PARVGQ9HBI0 331 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 RXFP1Q9HBX9 757 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 SLC38A7Q9NVC3 462 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 FBXO2Q9UK22 296 aaPredicted RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 MTMR6Q9Y217 621 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 SRPRBQ9Y5M8 271 aaKnown RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 PDCD11Q14690 1871 aaKnown RBP10.31□□□□□ -0.76
PDPN-204ENST00000475043 DENND4AQ7Z401 1863 aa10.31□□□□□ -0.76
PDPN-204ENST00000475043 CCDC195A0A1B0GUA6 201 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 C2CD4DB7Z1M9 353 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 HNRNPDLO14979 420 aaKnown RBP10.3□□□□□ -0.76
PDPN-204ENST00000475043 TGM5O43548 720 aa10.3□□□□□ -0.76
PDPN-204ENST00000475043 TRAK2O60296 914 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms