RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 KRT39Q6A163 491 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 OTUD6AQ7L8S5 288 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 ATP6V0A4Q9HBG4 840 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 CD248Q9HCU0 757 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 RAB20Q9NX57 234 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 CNOT8Q9UFF9 292 aaKnown RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 CD2APQ9Y5K6 639 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 LTBP3Q9NS15 1303 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 C19orf81C9J6K1 198 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 GJB6O95452 261 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 NF2P35240 595 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 EIF3BP55884 814 aaKnown RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 MAGOHP61326 146 aaKnown RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 DHX9Q08211 1270 aaKnown RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 GKAP1Q5VSY0 366 aaPredicted RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 PASD1Q8IV76 773 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 CCDC50Q8IVM0 306 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 SHC3Q92529 594 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 MAGOHBQ96A72 148 aaKnown RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 OTOFQ9HC10 1997 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 ECM2O94769 699 aaPredicted RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 COMTP21964 271 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 ALDH5A1P51649 535 aaPredicted RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 MYBPC2Q14324 1141 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 Q3C1V9 767 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 ANKRD20A8PQ5CZ79 823 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 CRELD2Q6UXH1 353 aaPredicted RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 TAX1BP1Q86VP1 789 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 CPA5Q8WXQ8 436 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 KIFAP3Q92845 792 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 COPS5Q92905 334 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 SENP7Q9BQF6 1050 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 NTPCRQ9BSD7 190 aaKnown RBP13.33□□□□□ -0.28
RNF220-211ENST00000474956 ZNF302Q9NR11 478 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 ARHGAP28Q9P2N2 729 aa13.33□□□□□ -0.28
RNF220-211ENST00000474956 GSTTP1A0A1W2PQM5 241 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 O00370 1275 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 DGAT1O75907 488 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 CETN1Q12798 172 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 ALCAMQ13740 583 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 LACTB2Q53H82 288 aaPredicted RBP13.32□□□□□ -0.28
RNF220-211ENST00000474956 TDRD10Q5VZ19 366 aaKnown RBP13.32□□□□□ -0.28
RNF220-211ENST00000474956 FBXL13Q8NEE6 735 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 DDX1Q92499 740 aaKnown RBP13.32□□□□□ -0.28
RNF220-211ENST00000474956 C18orf8Q96DM3 657 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 MFSD14AQ96MC6 490 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 TMEM8AQ9HCN3 771 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 FBXO40Q9UH90 709 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 TTC7AQ9ULT0 858 aaPredicted RBP13.32□□□□□ -0.28
RNF220-211ENST00000474956 GRIN3BO60391 1043 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 TNFSF9P41273 254 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 LIG4P49917 911 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 IFFO1Q0D2I5 559 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 STXBP2Q15833 593 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 GJC2Q5T442 439 aaPredicted RBP13.32□□□□□ -0.28
RNF220-211ENST00000474956 CPLX4Q7Z7G2 160 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 GPD1LQ8N335 351 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 LRRC71Q8N4P6 559 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 OR5B17Q8NGF7 314 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 FBXL18Q96ME1 805 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 RAB17Q9H0T7 212 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
RNF220-211ENST00000474956 DNM1LO00429 736 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 TNNI1P19237 187 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 SNCBQ16143 134 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 PPP2R5EQ16537 467 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 PREPLQ4J6C6 727 aaPredicted RBP13.31□□□□□ -0.28
RNF220-211ENST00000474956 MIS18BP1Q6P0N0 1132 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 LBX2Q6XYB7 198 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 ZBTB33Q86T24 672 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 FUKQ8N0W3 1084 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 GPC2Q8N158 579 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 SGSM3Q96HU1 749 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 PPP1R16BQ96T49 567 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 NUP85Q9BW27 656 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 APOBEC3GQ9HC16 384 aaKnown RBP13.31□□□□□ -0.28
RNF220-211ENST00000474956 GINM1Q9NU53 330 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 CSDE1O75534 798 aaKnown RBP13.31□□□□□ -0.28
RNF220-211ENST00000474956 FARP2O94887 1054 aaPredicted RBP13.31□□□□□ -0.28
RNF220-211ENST00000474956 VNN1O95497 513 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 OATP04181 439 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 OAZ1P54368 228 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 NEDD9Q14511 834 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 HSDL1Q3SXM5 330 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 CYB5D1Q6P9G0 228 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 CENPTQ96BT3 561 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 ZNF653Q96CK0 615 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 FMO2Q99518 471 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 EXOC7Q9UPT5 735 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 DIS3Q9Y2L1 958 aaKnown RBP13.31□□□□□ -0.28
RNF220-211ENST00000474956 PPFIA2O75334 1257 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 PYGMP11217 842 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 POU5F1Q01860 360 aaKnown RBP13.31□□□□□ -0.28
RNF220-211ENST00000474956 GNPTABQ3T906 1256 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 WDR78Q5VTH9 848 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 HOOK3Q86VS8 718 aa13.31□□□□□ -0.28
RNF220-211ENST00000474956 PARP9Q8IXQ6 854 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms