RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 ZBTB8OSQ8IWT0 167 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 FBXL6Q8N531 539 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 TMEM105Q8N8V8 129 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 IGSF22Q8N9C0 903 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 FAM184AQ8NB25 1140 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 C3orf58Q8NDZ4 430 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 CNNM3Q8NE01 707 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 DEPTORQ8TB45 409 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 PBXIP1Q96AQ6 731 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 NECTIN4Q96NY8 510 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 PNMA5Q96PV4 448 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 NACC1Q96RE7 527 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 MYADMQ96S97 322 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 ANP32EQ9BTT0 268 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 CDT1Q9H211 546 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 SH2B1Q9NRF2 756 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-210ENST00000474684 MRPL17Q9NRX2 175 aaKnown RBP6.53□□□□□ -1.36
CPSF7-210ENST00000474684 CHST7Q9NS84 486 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 KANSL3Q9P2N6 904 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 ADAM28Q9UKQ2 775 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 NOL7Q9UMY1 257 aaKnown RBP6.53□□□□□ -1.36
CPSF7-210ENST00000474684 SORCS3Q9UPU3 1222 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 KIAA1024Q9UPX6 916 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 GDAQ9Y2T3 454 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 GIT1Q9Y2X7 761 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 ARIH1Q9Y4X5 557 aaPredicted RBP6.53□□□□□ -1.36
CPSF7-210ENST00000474684 SDK1Q7Z5N4 2213 aa6.53□□□□□ -1.36
CPSF7-210ENST00000474684 CLUHO75153 1309 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RNF223E7ERA6 249 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 I3L4J1 428 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 SMAPO00193 183 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 ACKR2O00590 384 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 N4BP3O15049 544 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 TGM5O43548 720 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 HIP1RO75146 1068 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RNF40O75150 1001 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 GLUD1P00367 558 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 ALDH2P05091 517 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 ADH1AP07327 375 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 XRCC6P12956 609 aaKnown RBP eCLIP6.52□□□□□ -1.37
CPSF7-210ENST00000474684 TRAPPC10P48553 1259 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 MRE11P49959 708 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 NTHL1P78549 312 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-210ENST00000474684 GRIN1Q05586 938 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RAD51AP2Q09MP3 1159 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 MTMR3Q13615 1198 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 GIT2Q14161 759 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RABEP1Q15276 862 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 MAPK6Q16659 721 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 TMEM132AQ24JP5 1023 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 CD300LGQ6UXG3 332 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RSPO2Q6UXX9 243 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-210ENST00000474684 GET4Q7L5D6 327 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-210ENST00000474684 PALB2Q86YC2 1186 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 SUGP1Q8IWZ8 645 aaKnown RBP6.52□□□□□ -1.37
CPSF7-210ENST00000474684 ERMNQ8TAM6 284 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RSAD2Q8WXG1 361 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RIN2Q8WYP3 895 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-210ENST00000474684 TMX3Q96JJ7 454 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 ZSCAN31Q96LW9 406 aaPredicted RBP6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RIPOR3Q96MK2 946 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 PPP1R10Q96QC0 940 aaKnown RBP6.52□□□□□ -1.37
CPSF7-210ENST00000474684 PLIN2Q99541 437 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 EMILIN2Q9BXX0 1053 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 C2orf40Q9H1Z8 148 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 RXFP1Q9HBX9 757 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 ARHGAP28Q9P2N2 729 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 LRWD1Q9UFC0 647 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 LIMD1Q9UGP4 676 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 FBXW11Q9UKB1 542 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 NR2E1Q9Y466 385 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 MYOFQ9NZM1 2061 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 WDR87Q6ZQQ6 2873 aa6.52□□□□□ -1.37
CPSF7-210ENST00000474684 SF3B1O75533 1304 aaKnown RBP eCLIP6.51□□□□□ -1.37
CPSF7-210ENST00000474684 NPHP3-ACAD11A0A0J9YXS1 232 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 CARNS1A5YM72 827 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 SFI1A8K8P3 1242 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 HARSP12081 509 aaKnown RBP6.51□□□□□ -1.37
CPSF7-210ENST00000474684 GJB2P29033 226 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 TKTP29401 623 aaKnown RBP6.51□□□□□ -1.37
CPSF7-210ENST00000474684 BRCC3P46736 316 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 NPTX2P47972 431 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 CLCNKBP51801 687 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 PEX3P56589 373 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 COPS2P61201 443 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 OSTNP61366 133 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 ZRSR1Q15695 479 aaKnown RBP6.51□□□□□ -1.37
CPSF7-210ENST00000474684 PSMD5Q16401 504 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 USP41Q3LFD5 358 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 DCAF4L1Q3SXM0 396 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 ZNF568Q3ZCX4 644 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 TMEM119Q4V9L6 283 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 SEZ6Q53EL9 994 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 ATAT1Q5SQI0 421 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 ATF7IP2Q5U623 682 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 FAM171A1Q5VUB5 890 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 MCTP1Q6DN14 999 aa6.51□□□□□ -1.37
CPSF7-210ENST00000474684 RINT1Q6NUQ1 792 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms